Vidua chalybeata (village indigobird): 128788592
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Entry
128788592 CDS
T11587
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04115
p53 signaling pathway
vcha04210
Apoptosis
vcha05164
Influenza A
vcha05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128788592 (APAF1)
04115 p53 signaling pathway
128788592 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
128788592 (APAF1)
05168 Herpes simplex virus 1 infection
128788592 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
APAF1_C
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WHD_APAF1
Beta-prop_WDR90_POC16_2nd
NB-ARC
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_EIPR1
CARD
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
eIF2A
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_SCAP
ASA1
CARD_2
PEP5_VPS11_N
Tricorn_2nd
WD40_like
Beta-prop_NUP159_NUP214
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_RSE1_2nd
Beta-prop_Nup120_160
Beta-prop_WDR11_2nd
Beta-prop_DCAF12
WDR54
AAA_16
WHD_Dark
AAA_22
nSTAND6
RAB3GAP2_N
DUF2415
PAC11
Motif
Other DBs
NCBI-GeneID:
128788592
NCBI-ProteinID:
XP_053799716
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All DBs
Position
5:15502129..15532304
Genome browser
AA seq
1249 aa
AA seq
DB search
MDVKSRNYLLKNRQALENDIKTSYIMDRMISDEVLTLQEEERVKQQNTQKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKKKLYCLGSDPGWVTVYGMAGCGKTVLTAEALRDPQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANSLVRECKGSPLVISLIGALLRDFPSRWEYYLRQLQNKQFRRIRKSSSYD
YEALDEAMSISVEQLDDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVLSQEDC
MYWYNFLAYHMAGAKMQQELRDLMFSLDWIKAKTELVGPAHLIHEYVEYSSVLDQKDSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGAFYLEWINKKS
LKNLYRLVVRPHRDAVYHACFSKDRQRIASCGADKTLQVFKAESGERLLDINAHDDEVLC
CAFSADGEFVATCSSDKKVKVWNSRTGQCRCVYEEHSEQVNCCQFNNKSGQYLLATCSND
TFIKIWNLNEKYCRNTMIGHDNSVNHCRFSPNDEYVASCSTDGTVKLWEARSGNELKSIE
IKDFFKNADEQPDDVEVLVKCCSWSRNGNMILVVAKNKLLLFDINTCGLLTQVTVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETKKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKNLQLINGNTDNVIMQTAA
QESPISCCCLSEDLKFAAFGQESGTIKVLQLSDGKVLKSREAYRTSVQHCRFTPDCQTLI
SSAHDSVIQVWNWQLSECVFLRGHNEAIKDFRLLENSKILSWSFDGTVKVWNITTGNPER
DFACHGGAVLSCAVSPDGSKFSSASADKTAKIWSFESSSVLHELKDHEACVRCCTFSPNN
KLLATGDDKGEIRIWDVLTGALLHFCSPVTVDEGEPTHGGWVTDLSFSPDSKMLVSSGGY
LKWWNVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKF
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaagagtagaaactatttgcttaagaatcgtcaagcactggaaaatgacatc
aagacttcttatattatggatcgcatgatttctgatgaagtactgacattacaggaggag
gagagagtgaagcaacagaatacacagaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactactccatgaagggtac
agagatcttgctgcgcttcttcaggacggcatccctgctgtctcgtctggtaacagaaag
agttcaatggatggaatgacttcctacgtgaagaccattctctgcgaagggggcgtacca
cagagaccagttgtgtttgtcactcgaccaaaactggtagatgctattaaaaagaaactg
tactgcttgggaagtgatccaggttgggtcacagtttatggaatggcaggctgtgggaag
actgttttaacagcagaagctttaagggatcctcagctcttggaagattactttccagga
ggagttcactggatctctgttgggaaacaggacaaagcagggctgctcataaaacttcag
aatctctgtagtagattggagcatgactccactctttcacaaaggccaccacttaacatt
gaggaggctaaagatcgtcttcgtttgctgatgttacgcaaataccccaggtctcttttg
gtcctggatgacatttgggattcctgggtgttaaaagcatttgataatcaatgtcaggta
ctcatcacaagcagggacaggagtgtaacagatgctgtggctggcaataaatatgaggtt
catgtggaaagtggactagcacatgagaaaggactggagattttatccctatttgtgaat
atgaaaatatcagaacttccagaacaagctaactctcttgtaagagaatgcaaaggttct
cctctcgtgatatccttgataggtgcgttactacgagacttcccaagccgctgggaatac
tatctcaggcagctgcagaataagcagtttagaagaataagaaaatcttcctcctatgat
tacgaagcccttgatgaagcaatgtccataagtgttgagcagctggatgacaattacaaa
gactactataaagacctctctatcctcccaaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaagttgaagacatactacaggaatttgttaac
aaatcactgttgttctgtgatcgtaatgggaagtcatttcactattatttacatgatctt
cagcttgactttctcacagagaagaaccgcaaccagcttcaggagctacataaaaacata
gtaaatcagtacaagaaatactacaagcttaatacacctgttctgtctcaagaggattgc
atgtactggtataactttctagcatatcacatggcaggtgccaaaatgcagcaggagctc
cgtgatcttatgttttctttagattggattaaagctaaaacagaattggtgggacctgct
cacctgattcatgaatatgtagaatatagttcagtcctggatcaaaaggatagcacagtg
cgtgagaatttccaggagtttctgtccttaaatgggcaccttcttggacggcagccgttt
cctgacatcattcagctgggtctttgccagcccgagacatcagaggtgtatcaacaggcc
aagctacatgcccaaagggaaacaggagcattttatttggagtggataaataaaaaatcc
ttgaaaaatctctaccgtctggttgttcgtccacatagagatgcagtttaccatgcctgc
ttttctaaggatagacaaagaatagcatcatgtggagctgataaaactcttcaggtgttt
aaagcagaaagtggagagagactcctggatataaatgcccacgatgatgaagtactctgt
tgcgctttttctgcagatggtgaatttgtagcaacttgttcaagtgataaaaaagtcaag
gtctggaattcaagaacaggccagtgtaggtgtgtgtatgaagaacactcggagcaggtc
aattgctgccagttcaataacaaaagtggtcagtaccttctggccacctgctcaaatgac
actttcatcaaaatttggaatttgaatgaaaaatactgtagaaatacaatgataggtcat
gacaattctgtcaatcactgcagattttcaccaaatgatgaatatgttgctagctgctcg
acagatggaacagtaaagctttgggaagcacgctcaggaaatgaactgaaaagtattgag
ataaaagatttttttaaaaatgcagatgaacaaccagatgatgtggaggttttggtaaaa
tgttgctcttggtccagaaatggtaacatgattttggtggtagccaaaaataagcttttg
ctttttgacatcaacacctgtggtttgttaactcaagtcactgtcagtcatcacagcaca
atccaatactgtgacttctgtcctggggatgagttagtagcagttgctttgtctcactgc
tctgttgagttatggaatattaagtctttatcaaaagtggcatattgcagaggacacatg
agctgggttcactgtgtgacattttcaccagatggatctttatttctgacttcatctgat
gaccagacaatacgtatctgggaaacaaagaaggtgtgcaagtcttctgatgctgttcta
aagagtgaactagatgttgtgtttcacaatggtgaagtgatgattttagccatctacaat
cagaagaatttacaacttatcaatggaaatacagacaatgttattatgcagacagcagcc
caagaatcccccatttcttgctgttgcttaagtgaagatcttaaatttgcagcttttgga
caggagagtggaacaataaaggtactacagttgtcagatgggaaggttctgaagtcccgg
gaggcctacaggacatctgtgcagcattgtcgatttacacccgactgtcagactctcatc
tcaagtgctcatgattcagttatacaggtatggaattggcaattgagtgaatgtgtgttt
ctaagagggcacaatgaagcaatcaaggattttagacttctggaaaattcaaaaatcctc
tcctggtcatttgatggaactgttaaggtttggaatatcactactggaaacccagaaaga
gattttgcttgtcatggaggtgcagttctttcctgtgctgtttcacctgatggtagtaaa
ttttcatctgcttctgctgacaaaactgcaaagatatggagctttgaaagttcatctgtt
cttcatgaactgaaagaccacgaagcctgtgtgcggtgctgtactttctctcctaataac
aaactattggccactggagatgacaaaggagaaataaggatttgggacgttttaacaggt
gcattacttcatttctgctcccccgttactgtagatgaaggagaaccaacacatgggggt
tgggtaacagatctctccttttctcctgacagtaaaatgcttgtgtcatctggaggctat
cttaagtggtggaatgtaactactggagaatccttacaaaccttctacacaaatggaaca
aacctcaagtcaatacatgtgtcccctaatttcaaagtatatgtgactgttgataatctt
ggcattctttatgtattacagaagttctga
DBGET
integrated database retrieval system
