Vidua chalybeata (village indigobird): 128789782
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Entry
128789782 CDS
T11587
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04010
MAPK signaling pathway
vcha04120
Ubiquitin mediated proteolysis
vcha04140
Autophagy - animal
vcha04144
Endocytosis
vcha04517
IgSF CAM signaling
vcha04620
Toll-like receptor signaling pathway
vcha04621
NOD-like receptor signaling pathway
vcha04622
RIG-I-like receptor signaling pathway
vcha05132
Salmonella infection
vcha05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128789782 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128789782 (TRAF6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128789782 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128789782 (TRAF6)
04140 Autophagy - animal
128789782 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128789782 (TRAF6)
04621 NOD-like receptor signaling pathway
128789782 (TRAF6)
04622 RIG-I-like receptor signaling pathway
128789782 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128789782 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
128789782 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128789782 (TRAF6)
04121 Ubiquitin system [BR:
vcha04121
]
128789782 (TRAF6)
Enzymes [BR:
vcha01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128789782 (TRAF6)
Membrane trafficking [BR:
vcha04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128789782 (TRAF6)
Ubiquitin system [BR:
vcha04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128789782 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
zf-RING_5
SlyX
PspA_IM30
Med21
RING_XB3-XBAT31
TRAF3_RING
zf-RING_11
CCDC18_1st
Sina_ZnF
HAP1_N
CENP-F_leu_zip
U-box
DUF4455
PMD1-like
UPF0242
CCDC39
Spc29
ATG16
DUF1664
DUF2247
HMMR_N
DUF16
DUF8221
ADIP
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
128789782
NCBI-ProteinID:
XP_053801952
UniProt:
A0A851KIK0
LinkDB
All DBs
Position
6:43422679..43443997
Genome browser
AA seq
545 aa
AA seq
DB search
MSLLHSDSSCGGRDGESGCCAAMASACSATAKEESSSVGSGAGNAPGSFTEETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVKCPNKGCSMKMELRHLEDHQLQCDFSTVECLQCQGTFPKNHLKEHMTQ
ECPRRQVCCPNCATSMAYEDKELHDQTCPLANIYCEYCNTVLIREQMPNHYDNDCPTAPV
PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPAL
FSHVSHAAYNCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL
EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVLHSPGFYTGKPGYKLCLRLHIQL
PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL
AFQRPTVHRNPKGFGYVTFMHLETLKQRTFIKDDTLLVRCEVLTRLDLNSVRREGFQPRS
TDGAM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctgcacagtgacagcagctgtggaggccgagacggggagagcggctgctgc
gcagccatggccagcgcctgcagcgccacagccaaggaggagagctccagcgtgggcagt
ggtgctggcaacgcgcctggctccttcaccgaggagacgcagggatatgacgtggagttc
gatccgccgctggaaagtaaatatgagtgtcccatctgcttgatggctctccgggaagca
gtgcagacaccgtgtggccaccgtttctgcaaaggctgcattgtcaaatcaataagagat
gcaggtcacaaatgtcctgtagacaatgaaattctgcttgaaaatcaactttttcctgac
aactttgccaaacgggaaatcctttcattaatggtcaaatgtcccaacaagggctgcagc
atgaagatggagctcaggcacttagaggaccaccagctgcagtgtgatttttccactgtg
gaatgcctacagtgccaaggaaccttcccaaagaaccatctgaaagagcacatgacccaa
gagtgtccgaggcgtcaagtgtgttgcccaaactgtgccacatctatggcctatgaagat
aaagagcttcatgaccaaacttgcccacttgccaatatatattgtgaatattgcaacacg
gtgctcatcagagagcagatgcctaaccattatgacaatgattgtcctactgccccagtg
ccatgtttttacagtgcctttgggtgtcctgaaaagatgcaaaggaatgaactggcacga
catatgcaggagttcactcaggttcacatgaggatgatggctcagagttttcaaaatatc
agtgttactgctgcaaatcctgtacccttcatcaatggcctaccctttgagcctgccctc
ttctcacacgtgtcacatgctgcatacaactgcaatccagaagttgaaaacttcaaggaa
actattcagcagttggaaggtcgtctggtgagacaagatcaccaaatcagggaactcatt
gctaaaatggagactcagaacactcacatggcagaactcaaacgtactatccgcaattta
gagggaaagattactgaaatggaggcacaacaatgtaatggtatttatatctggaagatt
gagaacttcagtggattgcaaaaagcccaggaagaagagagacctgtagtgttgcacagt
cctggcttctataccgggaagcctggctacaagctgtgcttgcgcctgcatatccagtta
ccaaatgctcagcgctgtgctaattttatctctctgtttgtgcacactatgcaaggggaa
tatgacagccacctgccctggcctttccaaggcaccattcgactttctattttggatcaa
tcagaaggcccagaaaggcagaaccatgaagaggtgatggaagccaagccagagctactg
gccttccagagaccgacagttcaccgcaatccgaaaggttttggatatgtgactttcatg
cacctggagaccttgaaacagagaaccttcatcaaggatgacacactcctggtgcgctgt
gaggtcctcacgcgcctggacttgaacagtgtccgcagagaagggttccagccccgcagt
actgatggagccatgtag
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integrated database retrieval system
