Vidua chalybeata (village indigobird): 128800175
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Entry
128800175 CDS
T11587
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcha04040
]
128800175 (SCN4A)
Ion channels [BR:
vcha04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128800175 (SCN4A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
HpsJ
Motif
Other DBs
NCBI-GeneID:
128800175
NCBI-ProteinID:
XP_053821157
LinkDB
All DBs
Position
26:complement(5163117..5207206)
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AA seq
1843 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPASLAAIEQRMAEAEALRIKRQQVEMPEEEEVKPSSDLEAGKN
LPLIYGDPPVELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYMLGPFNPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTMSNPPAWSKNVEYAFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPPNSTFLQDLGLDNDTSVN
STFYGFMDDFTGNFTGNFTGNFTGNSTFDFEAYISDEANYYFLEGALDALLCGNSSDAGK
CPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFV
VVIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKQQEEQERLLQE
HSSSSNSLPSSVAGKGHDSDLNSDQDKAKDCNGQVVPKITLQRSDTVIDFNPTYELEKPD
LNHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLVWNCCRPWV
KLKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEM
VLKLIALDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPT
LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRWHMN
DFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSF
SADSLAASDDDGEMNNLQIAIGRITRGIAFAKASLLALLRRLWKGKKVAPEEEQDPSKRD
NSVLNHVDMALEPKSGYLDGITGKEHIFMDELDHMNFINNPNLTVQVPIASEESDLYEET
STQSDTEDTTKNPLSSDNASSVCSTVDYKPPAPEEEEVAEVAEESNEPEECFTEGCVKRF
PCLYVDITSEKGKIWWNLRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIR
TILEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYSEL
GAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLF
AGKYYRCVNTTTGELFNIDAVNNKTDCMALLYTNEVRWVNVKVNFDNVGLGYLSLLQVAT
FKGWMDIMYAAVDSREIEEQPQYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQK
KKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGKVFDFVTKQVFDITIMIL
ICLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRHYFFTVGWNIFDFV
VVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLL
NPILNSGPPDCDPELENPGSSVKGDCGNPAIGIFFFCSYIIISFLIVVNMYIAIILENFS
VATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLRVPKPNKIKLI
TMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTL
KRKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSQDTLGEDAPEKEGLIATKMQEIYGN
TGTDVETAPALGLKPIPSSETAQDAPEEAQAWGKEHVVKESLV
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacattccgggccccgagaacctgcgccccttcaccccagcctcg
ctggccgccatcgagcagcgcatggccgaggccgaggcgctccggataaagcggcagcag
gtggagatgcctgaggaagaggaggtcaagcccagcagtgacctggaggccggcaagaac
ttgcccctcatctatggtgacccacccgtggagctcattgggacccccctggaggacctg
gaccctttctacaaggacaagaagaccttcatagtcctcaacaagggcaagtccatcttc
cgcttctcggccacccctgccctctacatgctggggcccttcaaccccatccgcagagga
gccatcaaagtcctcatccattcattattcagcatgttcatcatgatcaccattttaacc
aactgtgtgtttatgacgatgagcaaccctccagcatggtccaagaatgtggaatacgcc
ttcactgggatctacaccttcgagtctctcatcaagatcctgtcgaggggcttctgcatc
gacgacttcacattcctgcgtgacccctggaactggctggacttcatggtcatctccatg
gcctacattaccgagttcgtggacctggggaacatctccgctctcaggaccttccgtgtc
ctccgtgccttgaaaaccatcacggtgataccagggctgaagacgatcgtgggggctctg
atccagtcggtgaagaagctctcggacgtgatgatcctcacggttttctgcctgagcgtc
ttcgccctcatcggcctccagctcttcatgggcaacctccggcagaagtgtgtgcgctgg
cctccccccaacagcaccttcctgcaggatctggggctggacaacgacacctcagtcaac
tcaaccttctacggcttcatggatgactttaccgggaacttcactgggaacttcaccggg
aacttcaccgggaacagcacctttgacttcgaggcctacatcagcgatgaagccaattac
tacttcctggagggagccctggatgccctgctctgcgggaacagcagcgacgctgggaag
tgccccgagggctacgagtgcatgaaggccgggaggaaccccaactatggctacaccagc
tacgacaccttcagctgggccttcctggccctcttccgcctcatgacccaggacttctgg
gagaaccttttccagctgacactgcgcgcagcagggaaaacctacatgatcttcttcgtg
gtggtcatcttcctgggctccttctacctcatcaacctcatcctggccgtggtggccatg
gcttacgccgagcagaacgacgccaccatgctggaggagcagcagaaggaggaggaattc
cagcagctcatggaacagctgaagaagcagcaagaggagcaggaaaggctgttgcaggag
cactcgtccagcagcaattccctgcccagcagcgtggccgggaagggacacgactcagac
ctcaacagtgaccaggacaaggctaaggactgcaacgggcaggtggtgcccaagatcacc
ctgcagagatccgacaccgtgattgatttcaaccccacctatgagctggagaagccagac
ctcaaccacctcactgtgggcaaccaagatgggccagggctggagaagagggtgggaagt
gctatcagtgtcatctccaacgctgtggaagagctggaagaagctcaccagaaatgccca
ccctggtggtacaaattcgcccacacattcctggtctggaattgctgccgtccgtgggtg
aagctgaaggagtttgtcaagctggtggtgatggaccccttcgtggacctgggcatcacc
atctgcatcgtgctcaacactctcttcatggccatggagcactaccccatgacggaagag
ttcgagaatgtgctgactgtggggaacctggtcttcacagggatcttcacggcggagatg
gtcctgaagctcattgctctggatccctacgagtatttccagcagggctggaacatcttt
gacagcttcatcgtcactctgagcctggtggagctgggcttggccaacgtgcaggggctc
tccgtgctccgctccttccgcctgctgagggttttcaagctggccaagtcctggcccact
ctcaacatgctcatcaagatcatcggcaactccgtgggtgccctgggcaacctcacgctg
gttctggccatcatcgtcttcatcttcgccgtggtggggatgcagctctttggcaagagc
tacatcgagtgcgtgtgcaagatctcggtggactgcaccctgccccgctggcacatgaat
gacttcttccactccttcctcattgtcttccgcatcctctgcggggagtggatcgagacc
atgtgggactgcatggaggtggccggccagaccatgtgcctcatcgtcttcatgatggtc
atggtcatcgggaacctcgtggtgctaaacctgttcctggctctgctgctgagctccttc
agtgccgacagcctggcggcgtcggacgacgatggggagatgaacaacctgcagatcgcc
attggccgcatcacccgtggcatcgccttcgccaaggcctcgctcctggcgctgctgcgc
cggctctggaagggcaagaaggtggcaccagaggaagagcaggaccccagcaagagagac
aactctgtgctcaaccacgtggacatggccctggagcccaagtcagggtacctggatggc
atcacaggcaaggagcacattttcatggatgagctggaccacatgaatttcatcaacaac
cccaacctgacggtgcaggtccccatcgcctctgaggagtccgacctctacgaggagacc
agcacccagtctgataccgaggacaccaccaagaaccccctgtccagcgacaacgcctcg
tccgtgtgcagcacggtggattacaaaccccccgcgcccgaggaggaggaggtggcagaa
gtggctgaggagagcaacgagcccgaggagtgtttcactgagggctgtgtgaagaggttc
ccctgcctctacgtggacatcaccagtgagaaggggaagatttggtggaacctcaggaaa
acctgcttccgcatcgtggagcacgactggttcgagaccttcatcgtcttcatgatcctc
ctcagcagcggggcactggctttcgaggacatctacatcgagcagcgcaaggtgatccgc
accatcctggaatacgcagacaaggtcttctcctacatcttcgtcatcgagatgctgctc
aagtgggtggcctatggcttcaaggtgtacttcaccaatgcctggtgctggctggatttc
ctcatcgtggatgtgtccctggtcagcctgacagcaaactggctgggatactccgagctg
ggagccatcaaatccctgcggacactgagggctctgcgacccctgcgtgctctgtcccgt
tttgagggcatgagggtggtggtgaatgccctggtgggtgccatcccctccatcatgaac
gtcctgctggtctgcctcatcttctggctgatcttcagcatcatgggggtgaacctattc
gcagggaagtactacaggtgtgtcaacaccaccaccggggagctcttcaacatcgacgcg
gtcaacaacaagaccgactgcatggccctgctctacaccaacgaggtcagatgggtcaac
gtcaaggtcaacttcgacaacgtgggcttgggatacctgtccctgctgcaggtggcaacc
ttcaaaggctggatggacatcatgtacgcagccgtggactcacgtgagattgaagagcag
ccacagtacgagatcaacctctacatgtacatctacttcgtcatcttcatcatcttcggt
gccttcttcaccctgaacctcttcatcggcgtcatcatcgacaacttcaaccagcaaaag
aaaaagtttggaggcaaagacatcttcatgacagaagagcagaagaaatactacaacgcc
atgaagaagctgggctccaagaaaccccagaagcccatccccaggccagcgaacaaattc
caagggaaggtgtttgacttcgttaccaagcaagtgtttgacatcaccatcatgatcctg
atttgcctgaacatggtgaccatgatggtggaaacagatgaccagagcgagctcaaaacc
tctgtcctctataagataaacctggtcttcatcgtcatcttcactggggagtgcgtgctc
aagatgttcgccctgcgccactacttcttcactgtgggctggaacatcttcgacttcgtg
gtggttatcctctccatcctaggtatcgttctctcagatatcatcgagaagtactttgtg
tcccccaccctcttcagggtcatccgtctggcgaggatcggccgcgtgctgcggctgatc
cgaggagccaaaggcatccggacgctcctctttgccctgatgatgtccctgcccgccctg
ttcaacatcggcctcctgctcttcctcgtcatgttcatctactccatctttggcatgtcc
aacttcgcctacgttaagaaggagtcagggatcgatgacatcttcaactttgaaaccttc
gggaacagcatcatctgcctcttccagatcaccacatcagcggggtgggatgggctcctc
aaccccatcctcaacagcggccccccggactgtgaccccgagctggagaaccccgggagt
tcggtgaaaggagactgtgggaaccccgccatcggcatcttcttcttctgcagctacatc
atcatctccttcctcatcgtggtgaacatgtacatcgccatcatcctggagaacttcagc
gtggccacggaggagagcagcgagcccctctgtgaagacgattttgaaatgttttatgaa
acttgggagaagtttgacccggacgccacccagttcatcgcctacagcaccttgtcggac
tttgtggacaccttgcaggagccactcagagttcccaagcccaacaagatcaaactcatc
accatggatctaccaatggttgctggggacaaaatccactgcctggacatcctctttgcc
ctgactaaggaagtgctgggagactcgggagagatggatgccctgaaggccaccatggag
gagaagttcatggctgccaacccctcaaaggtttcctatgaacccatcaccaccaccctg
aagaggaaacacgaggaggtgtgtgctaccaagattcagagggctttccggaggtacctc
ctgaggcgctcggtgaagcaggcatcctacatgtacaggcacagccaggacaccctgggc
gaggacgcgcccgagaaggaagggctgatagccaccaaaatgcaggagatctatgggaac
actgggacagatgtggagactgcccctgccttaggcctcaagcccattcccagctcagag
acagcccaggatgctcctgaggaagcacaggcctggggtaaggaacacgtggtgaaagag
tcgctggtgtaa
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