Vidua chalybeata (village indigobird): 128802237
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Entry
128802237 CDS
T11587
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128802237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128802237
04121 Ubiquitin system [BR:
vcha04121
]
128802237
Membrane trafficking [BR:
vcha04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
128802237
Ubiquitin system [BR:
vcha04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128802237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
DSE1_N
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF12
ASA1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
F-box
Beta-prop_Aladin
Beta-prop_ACSF4
CFAP251_N
Beta-prop_RIG_1st
Beta-prop_NOL10_N
TRM82_WD
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
PAC11
WDR90_beta-prop_4th
PQQ_2
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_IFT140_2nd
WD40_RFWD3
Beta-prop_NWD2_C
KNTC1_N
PALB2_WD40
Beta-prop_WDR19_2nd
Vts1
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
128802237
NCBI-ProteinID:
XP_053824481
LinkDB
All DBs
Position
2:138356..145152
Genome browser
AA seq
679 aa
AA seq
DB search
MTCRRCPGPEGPPRASPTPLGDSEDHRAPAAQVVAEEEEDEEEEEAAAPGPWEPEHPWKG
TPRSGADPDGSGGRGPQEPPRSTREEEEEEEEEEEEEGSCCSEEGEDSSNVYLYYTLGER
WIDYLQRTGDGGLLRHLRPKMKRKSENGPDGRALSPGKKLCKGSDYGRTLGPCTPSPTTT
FGDLRNAKVGQARRRRIPSVAPPPELQDWLRTFQRWSGPEKLLALDELIDRCEPAQIKYM
MQVIEPQFQRDFISLLPKELALYVLSFLEPRDLLRAAQTCRYWRVLAEDNLLWREKCREE
GIEEPLHLRKRRLLSPGFMYSPWKFAFLRQHRIDMNWRSGELRPPKVLKGHDDHVITCLQ
FCGNRIVSGSDDNTLKVWSAVTGECVQTLVGHTGGVWSSQMRDSIVISGSTDRTLKVWNA
DSGECVHTLYGHTSTVRCMHLHGNRVVSGSRDATLRLWDIETGQCLHVLMGHVAAVRCVQ
YDGNKVVSGAYDYTVKVWDPESESCTHTLQGHTNRVYSLQFDGTHIVSGSLDTSIRVWDV
ESGNCLHTLMGHQSLTSGMELRDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVT
CLQFSSKFVVTSSDDGTVKLWDLKTGEFVRNLVALESGGSGGVVWRIRASNTKLVCAVGS
RNGTEETKLLVLDFDVDLK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgccggcggtgcccgggccccgaggggcccccacgagccagccccactcccctg
ggggacagtgaggaccacagggcacctgcggcacaggtggtggctgaagaggaggaagat
gaggaggaggaggaggcggcggcgccagggccctgggagccggagcacccctggaagggt
acccccaggtccggagcagaccctgatggttctggggggcggggaccacaggagcccccc
aggtccaccagggaggaggaggaggaagaagaggaggaggaggaggaagaagggagctgc
tgcagcgaggagggggaagacagcagcaacgtatacctgtactacacgctgggcgagcgc
tggatcgactacctgcagcgcactggggatggggggctgctgcggcacctgcgccccaag
atgaagcggaagtcagagaatggtccagatggccgggccttgtcccccgggaagaagctg
tgcaagggctctgactatggcaggacactgggtccctgtacacctagccccacgaccacc
tttggggacctgcgcaatgccaaggtggggcaggcccggcgccgtcgcatcccctcggtg
gctcccccacctgagctacaggactggctccgcaccttccagcgctggagcggccctgag
aagctgctggccctggatgagctcattgaccgctgcgagccggcgcagatcaagtacatg
atgcaggtcatcgagccccagttccagcgggacttcatctccctgctgcccaaggagctg
gccctgtacgtcttgtctttcctggagccacgggacctgctccgtgctgcccagacttgc
cgctactggagagtcctggctgaggacaatctgctctggagggagaagtgccgtgaggaa
gggatcgaggagcccctacacctgcggaagcgacgcctgctcagccccggattcatgtac
agcccctggaaattcgccttcctgcgccagcaccgcatcgacatgaactggcgcagtggg
gagctgcggccccccaaggtactgaagggccacgacgaccatgtgatcacctgcctgcag
ttctgtggcaatcgcatagtaagcggctctgatgacaacacgctcaaagtgtggtcagct
gtcacaggggagtgtgtgcagacactggtgggccacactgggggggtttggtcctcccag
atgagggacagcattgtcatcagtggctccactgaccgcacactcaaggtgtggaacgct
gacagcggcgagtgcgtgcacacgctgtacggacacacctccaccgtgcgctgcatgcac
ctgcacggcaacagggtggtgagtggctcccgggatgccacgctgcggctctgggacatt
gagacggggcagtgcctgcacgtgctgatgggccacgtggcagctgtgcgctgcgtgcag
tacgacggcaacaaggtggtcagcggtgcctacgattacacggtcaaggtgtgggacccc
gagagcgagagctgcacccacacgctgcaggggcacaccaaccgtgtctactcactgcag
tttgatgggacacacatcgtgagcgggtccctggacacctcgatccgcgtgtgggatgtg
gagagtgggaactgcctgcacacgctcatggggcaccagtcactcaccagtgggatggag
ctgcgtgacaacatcctcgtctctggcaacgctgactccactgtcaaaatctgggacatc
aagacggggcagtgcctgcagacactgcagggtcccagcaagcaccagagtgctgtcacc
tgcctgcagttcagctccaagttcgtggtgaccagctcagatgacgggacagtgaagctg
tgggacctgaagacaggggagtttgtgcgaaacctcgtggccctggagagcgggggctcg
gggggcgtcgtgtggcgcatccgtgcctccaacacaaagctggtgtgcgccgtgggcagc
cgcaacggcaccgaggagaccaagctgctggtgctggactttgacgtggacctgaagtga
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