Vibrio cholerae O1 IEC224: O3Y_11480
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Entry
O3Y_11480 CDS
T01766
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
vci
Vibrio cholerae O1 IEC224
Pathway
vci00540
Lipopolysaccharide biosynthesis
vci01100
Metabolic pathways
Module
vci_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vci00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
O3Y_11480 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vci01005
]
O3Y_11480 (lpxC)
Enzymes [BR:
vci01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
O3Y_11480 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
vci01005
]
Lipid A
O3Y_11480 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AFC59166
LinkDB
All DBs
Position
I:complement(2610331..2611248)
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AA seq
305 aa
AA seq
DB search
MIRQRTLKEIVKTTGVGLHSGRKVTLTLRPAAANTGIIYRRTDVNPPVDFPADPASVRDT
MLCTALVNDQGVRISTVEHLNAALAGMGIDNAIIEVDAPEIPIMDGSASPFVYLLQQAGI
QTLNAPKRFIRIKKPVRIEDGDKWAEFVPFNGFRMDFEIEFNHPAIDGDDQRLVFDFSSQ
GFVKEISRARTFGFMRDIEYLQSQNLCLGGSFDCAIVLDDYRILNEEGLRFDNEFVTHKV
LDAIGDLYMAGHAIVGEFRAYKSGHGLNNQLLRAVLADQEAWEWATFEEEVGSPVAFAEP
NMVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacaacgtactctgaaagaaatagtgaaaacaactggggtgggcttacactct
ggtcgtaaagttacgctgactcttcgcccggccgcagccaatacggggattatttatcgt
cgtactgacgtcaacccaccggttgattttcctgccgatccggcttctgtgcgtgacacc
atgctttgtaccgctttggttaatgatcaaggtgtacgaatctctaccgtagagcatctt
aatgctgctttagcagggatggggatcgacaatgcgattatcgaagtggatgcacccgaa
attccaattatggatggcagtgcgagtccttttgtttacttgctgcaacaagcgggtatt
caaacactcaatgcaccaaaacgcttcatccgtatcaagaaacctgtacgcattgaagat
ggcgataagtgggctgaatttgttccatttaacggcttccgtatggatttcgaaattgag
ttcaaccacccagcgattgatggcgatgaccaacgcctcgtgtttgatttttcttcacag
ggttttgtgaaagaaatctctcgtgcgcgtacctttggttttatgcgtgatatcgaatat
ctgcaatcacaaaacctctgcttaggtggtagctttgattgcgcgatcgtgctggatgat
taccgtatcctgaatgaagaaggactgcgtttcgataacgagtttgtgactcataaagtg
ctggatgcgattggtgatctctacatggctggtcatgcgattgttggtgagttccgtgcc
tacaaatcaggccacggcttgaacaaccaactgctgcgtgcggtattggccgatcaagaa
gcatgggaatgggcaaccttcgaagaagaagtgggttcacctgttgcttttgctgaaccg
aacatggttctcgcgtaa
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