Vibrio cholerae O1 MJ-1236: VCD_001947
Help
Entry
VCD_001947 CDS
T00903
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00300
Lysine biosynthesis
vcj00550
Peptidoglycan biosynthesis
vcj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VCD_001947
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VCD_001947
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcj01011
]
VCD_001947
Enzymes [BR:
vcj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
VCD_001947
Peptidoglycan biosynthesis and degradation proteins [BR:
vcj01011
]
Precursor biosynthesis
Amino acid ligase
VCD_001947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACQ60116
LinkDB
All DBs
Position
1:1017155..1018654
Genome browser
AA seq
499 aa
AA seq
DB search
MRRNMNTHSAISELIAPWLELTDPKLAALVITHLELDSRLIKSGDTFVAIQGHAVDGRQF
IDKAIAQGANLVLAEADAQHLNGWVEYRAGVPVIYLAELGQHLSELAGRLYGGHHNQLIG
VTGTNGKTTITQLIAQWLELLGHKAAVMGTTGNGFLNALEPAANTTGNALQIQATLRDLA
ERGAQYTALETSSHGLVQGRVKKLHFVAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHA
CQNAIINVDDAVGAQWVKQLPQAIGVSLVTKPNTAQAIWAREVAYAESGITLNFESSWGE
GELHAPLIGEFNACNLLLALATLLSLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVV
DYAHTPDALEKALRALRVHCAGQLWAIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNP
RSESPQAIVADMVAGLTYPERAHIEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLAN
ETIHYSDRETAQQLLELQP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgagacggaacatgaacacgcattcagcgatctccgaactgatcgcgccatggctagag
ctgaccgaccctaagttggccgcgctggtcattactcatcttgaactggatagccgcctg
attaaatcgggtgatacctttgtggctattcaaggccatgcagtggatggtcgccaattt
atcgataaagccattgcgcaaggtgccaatcttgtgttggcagaagccgatgctcagcat
ctcaatgggtgggttgagtatcgtgctggtgtccccgtcatctatttggctgaacttggt
caacatctgtcagagttggctgggcgtctgtatggcggccaccacaatcaactgattggc
gtgacgggcacgaacggtaaaaccaccatcacccagctgattgctcaatggctcgaattg
ctcggtcataaagctgccgtgatgggcaccacggggaacggttttttaaatgcgcttgaa
cctgcggccaacaccacaggtaacgcactgcaaattcaggccacactgcgcgatttagcc
gagcgcggcgcgcaatatacggcgctggaaacctcgtctcatggtttagtgcaagggcgc
gtgaaaaagctccattttgtggccggtgtcttttccaatttgagccgtgaccatttggat
tatcacggcactatggaggcttacgccgccgcgaaattctctctatttagtgagcatgcc
tgccaaaacgcgattattaatgtcgatgatgcggtcggcgcgcaatgggtcaaacaattg
ccgcaggcgatcggggtttccttagtgacgaaaccaaacacagcgcaagccatctgggcg
cgcgaagtggcatacgctgaaagcggtattacgctgaactttgagagttcgtggggagaa
ggcgaattgcacgcaccactgattggtgagttcaatgcctgtaacttgttattggcattg
gcaaccttgctcagcttgggttttgagaaaagtgcactgctcgccactgcgccaaagctg
cgtccagtcttaggacggatggagctattccaacgtgagcaaaaagccaaaatggtggtc
gattatgcgcacacgccggacgctttagaaaaagcactgcgcgcgttacgtgtacattgt
gcgggtcagttgtgggctattgtggggtgtggcggcgatcgtgatcgcggtaaacgtccg
atgatggctgcgattgctgagcagtttgccgatcgcgtgatcttgaccgatgacaaccca
cgcagtgagtcgccgcaagcgattgtagcggatatggttgcaggactgacttaccccgag
cgcgctcatatcgaacaccaccgtttccaagccgcgagttatgcgcttcagcatgcaggt
gcgcaagacatcatcctgctcgcgggtaaaggacatgaagattatcaggtgctggccaac
gaaacgattcactactcggatcgtgaaaccgcccaacagttactggagttacaaccatga
DBGET
integrated database retrieval system
