Vibrio cholerae O1 LMA3984-4: VCLMA_A1077
Help
Entry
VCLMA_A1077 CDS
T01871
Name
(GenBank) Cytidine deaminase
KO
K01489
cytidine deaminase [EC:
3.5.4.5
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl00240
Pyrimidine metabolism
vcl01100
Metabolic pathways
vcl01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VCLMA_A1077
Enzymes [BR:
vcl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.5 cytidine deaminase
VCLMA_A1077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_2
dCMP_cyt_deam_1
Gta3
DUF5447
APOBEC_N
Zn_ribbon_TOP3B
SNAD4
Motif
Other DBs
NCBI-ProteinID:
AEA78330
LinkDB
All DBs
Position
I:complement(1207138..1208025)
Genome browser
AA seq
295 aa
AA seq
DB search
MRNRIEQALQPMPASFAPYLRELVLAKDFDATFSAEQYQQLLTLSGLEDADLRVALLPIA
AAYSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQLGQTVHAEQCAISHAWMKGEKGVA
DITINFSPCGHCRQFMNELTTASSLKIQLPKRAAKTLQEYLPESFGPADLGIDSGLMSPV
NHGKTSDDDEELIQQALRAMNISHSPYTQNFSGVALKMRSGAIYLGAYAENAAFNPSLPP
LQVALAQAMMMGESFEDIEAAALVESATGKISHLADTQATLEVINPDIPLSYLSL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaccgtattgaacaagcattacaaccaatgcctgcttcttttgccccatattta
cgtgaattggtgttggccaaggatttcgatgccactttctctgccgagcagtatcagcag
cttttgaccctttcgggtctggaagatgccgatttgcgcgtcgcgctgttacctatcgct
gccgcttactcgtatgcccccatctctgaattttatgtcggtgcgattgtacgtggcatc
tccggccgcctctatcttggcgccaatatggaatttactggtgcgcagcttggacaaacc
gtacatgctgagcagtgcgccattagccatgcgtggatgaaaggggaaaaaggggtggca
gacatcaccatcaactttagcccttgcggccattgccgccagtttatgaatgaactgacc
accgcgtcttcgctgaaaattcaactgcccaagcgtgctgccaaaactttgcaagagtac
ctccctgagtcgtttggccctgccgatctcggcattgattctggcctgatgagcccagtc
aatcatggtaaaaccagtgacgatgatgaagagctgatccagcaagccctgcgcgcgatg
aacatcagccactcgccttatacccaaaacttcagtggtgtggcactgaaaatgcgcagt
ggcgcgatttaccttggcgcgtatgccgaaaatgctgcgtttaacccaagtttgccaccg
ctacaagttgccttagcacaagcgatgatgatgggtgaatcattcgaggatattgaagcc
gccgctctggtagagagtgcaaccggcaaaatcagccatcttgccgatactcaagcaacg
ctggaagtgatcaatcccgatattccactttcttatctctcactgtaa
DBGET
integrated database retrieval system
