Volvox carteri f. nagariensis: VOLCADRAFT_103937 Help Entry VOLCADRAFT_103937 CDS       T01330                                  Name (RefSeq) hypothetical protein   KO K19656   intraflagellar transport protein 122 Organism vcn  Volvox carteri f. nagariensis Brite KEGG Orthology (KO) [BR:vcn00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:vcn03037]     VOLCADRAFT_103937 Cilium and associated proteins [BR:vcn03037]  Primary cilia and associated proteins   Intraflagellar transport (IFT) complex A    VOLCADRAFT_103937 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_IFT122_2nd Beta-prop_IFT122_1st WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Zn_ribbon_IFT122 WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd OGG_N TPR_GEMI5 TPR_IF140-IFT172 Beta-prop_IFT140_1st EIF3I Beta-prop_EML Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd NBCH_WD40 TPR_IFT80_172 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_2nd Beta-prop_Vps41 HhH-GPD Beta-prop_IFT80_2nd Clathrin HHH Beta-prop_NUP159_NUP214 RecR_HhH Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_WDR19_2nd TPR_COPA_B TPR_7 Beta-prop_LRRK2 Beta-prop_SPT8 RNA_pol_3_Rpc31 Motif Other DBs NCBI-GeneID:  9625208 NCBI-ProteinID:  XP_002948474 JGI:  103937 UniProt:  D8TQ61 LinkDB All DBs Position Unknown AA seq 1704 aa AA seqDB search MSDPNDPKPISIFESRMQVRLYQSENDVLFRVLARGRGADAAEDAAVLRDYFNLDTTRLC HLAIGWAASCSRFREVSPHFPGARMLRQDPLECLFQFICSSNNHISRIHGMVERLCSMYG TPLEPTTAPATPGAAAVAAASGSGALRLLLANGGHGPSCYRARFIVGTTRALLSKPGGGR AWLLGLRDVALGEAVEALTDLPGIGPKVAACICLFSLDKHEAIPVDTHVWQIAVRYYCPQ LAGKSLTKKVHGEVQQVFVERFGPYAGWLSHLASQQHRLPEHLRQGKKAAAPGGKRRGRG QQGRSSGGKQNGHDEELDDQGECERNSEGGNSGGRAAADVAAGGGDEDDDDDDEDDEDAE DGPGNRRGGASGRRYQARKKAAATAAVTAEQPVMKACEGTRDGGSRGLRKAAVAAACAAE QDAPQEPLVDVPARGGGRRRGPARQSRAVPLERKTGPQKTLPNGGGSGGGGGGGDDAGRV SMKSQPEKDGIRNVCYDLCFKPDGSQVVAGIGNRVLVYDAADGDLLHALKGHKDSIYCVA YAQNGKRFASGGADKTVIIWTSKAEGILKYTHNDAIQCLSYNPVTQQLASATASDVGLWS PEQKSVAKHKVASRICSISWTADGAYLALGCFDGVISIRDKGGSEKHRIETGPSPVWSIC WNPVETNVLCAGCFDGFLKFYMMSGQQKSKDRELAFDPLCVSYFSSGEYITVSGTDKTVH LYTRDGTYLTKIAERDSWVWAVRPRPKHNFVAVGTELGGIAMFQLIFSTVHGLYQDRYAY RDQMTDVIIQHLITEQKVRIKCKDYVKKIAVYKDKLAVQLQNKVVIYELANADDFDMHYQ SATKIQQKLDCNLLVVTSHHVILCQEKKLQLYNFDGVKEREWVLDSVIRYIKVVGGPPRR EGLLVGLKSGAILKIFVDNPFPIPLIKHTASVRCLDLSSSRNKLAVVDENAKVLVYNLIT KELVFEESNANSVAWNSEFEDMFCYSGNGMLSIKTGDFPLHQQKLQGFVVGFKGSKIFCL HYVSMQTIDVPQSASMYRYLERKDFESAYRVACLGVTEADWKQLALEALQALNLDVARKA FIRIRDVRFVELVNRTEAGRKGGTSEQLLLAEIMAFQGRYQEAARLFTQAGSVDKAMEMF SDLRQFDEAKKWAEEFAASGRGDQRSVQELINRQAEWSEEVKNYDAAAEMYIKAKKYDRA IAILAKHQWWDKLIGVVRQLDKTDARCLGMCAGHFRRASNFAYAKETLLKMDDTKGLITL YVEAEKWDDAFLLLHAHPECRQDVYLPYAKWLSSQDRFDEARLAYQEGGFPSLATRILEQ LCGNAVVESRFSDAAFYYYQLAMEALKSIKNPPSAMSPSDRTALERFTELYDRAEVYYAY DIVHKSVHSPFRTTHPDTLFNASRFLLMRTLPPREVPLGVSVVNIVYVMAKQAVEAGAFK LARFAYNKLQTLVLPAAWQAEVDLASVVIRSKPFSDKEDLLPVCWRCTTTNPLLNTQGDY CINCGAPFIRSFVTFEHLPVVEFELEPGIEDDDAQRLLGEDAGLEAARREQRAARQAKAA EMGGNVLRLDQDEINRMDDAFAAQMMVPNTTIRVDRAMLRRLKTAEVMVRTWPNPVIPRQ YFRVMDSEVPLCCGPCGHFFEQDEYEMAALERGSAPFSRTTVRPEGMVPGDDGDDDSPAP PTAGGLAPTSSVDVSIIDFCMALI NT seq 5115 nt NT seq  +upstreamnt  +downstreamnt atgtcagacccaaacgatcccaaaccaatttcaatttttgaaagtcgtatgcaggtacgc ctttaccagtccgagaacgacgtactgttccgtgtactagcacgaggccgaggtgccgac gcagccgaggacgccgccgtgcttcgcgattacttcaatttggatacaacaaggctgtgt caccttgcgatcggatgggcggcgagctgcagccgcttccgcgaagtcagtccccacttt ccaggcgcccgcatgctgcgacaggaccccctggagtgcttgttccagttcatctgctcg tccaacaaccacatttccaggatccatggcatggtggaacgcctctgtagcatgtacggc accccactagagccaaccacggcgccagcgacccctggcgctgccgctgtggcggctgcc agcggttcaggtgctttgcgcctcctcctcgcgaatggaggccatggcccttcctgctac cgtgcccgcttcatcgtggggacgactcgcgctctgttgtccaagcctggcgggggacgt gcatggcttctgggcctccgagacgtggctctaggggaggcggtggaggccctgacggat ctccctggtatcgggcctaaggtcgccgcctgcatctgcctcttctccctggacaagcac gaggccatccccgtagatacccacgtatggcagattgccgtacggtactactgtccgcag ctggccggcaagagcctcaccaagaaggtgcacggcgaagtacaacaggtcttcgttgag cggttcgggccctatgccggatggctctcacacttggccagtcaacagcaccgcctgccg gagcacctgcggcaggggaagaaggcggcggcgcctggcgggaagcgccgcggtcgcggt cagcagggcaggtcatcgggcgggaagcagaacggccacgacgaagagttggatgatcag ggcgaatgtgaacgtaacagcgagggtggaaacagcggcggtcgcgccgcggcggatgtt gctgctggcggcggtgacgaggacgacgacgacgacgacgaggatgatgaagatgcggag gatgggcctggcaacaggcgtggtggggctagcggtcgccgataccaagcgcggaagaaa gcagcagcaacagcagcagtaacggcggagcagccagtaatgaaagcttgcgaaggtact cgggacggagggtcccggggcttgaggaaagctgctgtggcggcagcttgtgcggcagag caggatgcgccacaggagcccctggtcgacgtgccggcccgtggcggaggaaggcggaga gggcccgcccggcagagtcgcgctgtgcccttggagcgaaagacgggaccgcagaagacg ctcccgaatgggggcggtagcggtggtggtggtggtggtggtgatgacgctgggcgcgtt tcgatgaaatcgcagcctgagaaggacggcatccgtaatgtttgttatgacttgtgcttc aaaccagatggatctcaagtcgttgccggcatcggcaatcgcgttctggtctacgatgct gcggacggcgacttgttgcacgcgctgaaaggccataaggactctatatactgcgtagcg tatgcccaaaatggaaagcgcttcgcgtcaggtggcgcggacaaaacggtcatcatctgg accagcaaggcggagggcatcctaaaatacacccacaacgacgccattcagtgcctctca tacaacccggtcacccagcaactggccagcgctactgcatcggacgtggggctctggtct ccggagcagaaatccgtagcaaaacacaaggtcgcgtcgcgcatctgctccatatcctgg accgccgatggagcctacctggcgttggggtgtttcgacggcgtcatcagcattcgcgac aagggcgggagtgagaagcaccggattgagaccgggccatcgcccgtgtggagcatctgc tggaaccccgtggagaccaacgtgctgtgcgcgggctgctttgacggcttcctgaagttc tacatgatgagcgggcagcagaagagcaaggaccgcgagctggcgtttgacccgctgtgt gtgtcgtacttcagcagcggggagtacatcaccgtcagcggaacggacaagaccgtgcac ctctacactcgcgacggcacctacctgaccaagattgcggagcgggatagctgggtgtgg gcggtgcggccgcggccgaaacacaacttcgtggcagtgggcacggagctgggcggcatt gccatgttccagctcatcttctccaccgtacacggcctctaccaggatcgctacgcctac cgcgaccagatgacggatgtgatcatccaacacctcattacggagcagaaggttcgcatc aagtgcaaggactacgtgaagaagattgcggtgtacaaggacaagctggcggtgcagctg cagaacaaggtggtcatttacgagctggccaacgcggacgactttgacatgcactaccag tccgccaccaagatacagcagaaactggactgcaacctgctggtagtcacctcacaccac gtcattctttgccaggagaagaagctccagttgtacaactttgacggcgtcaaggagcgc gagtgggtgctggacagcgtcatccgctacatcaaggtcgtgggcgggccgccgaggcgc gaggggctcctggtggggctcaagagcggcgccatcctcaagatctttgtggacaacccc ttccccatcccgctcatcaagcacaccgcgtccgtgcgctgcctggacctgtcctcctcg cgaaacaagctggctgtcgtggatgagaacgcaaaggtgctggtctacaatctcatcacc aaggagctggtgtttgaggagagcaacgccaactcggtggcctggaacagcgaatttgag gacatgttttgctacagcggcaatggcatgctgtccatcaagaccggcgactttccgctg caccagcagaagctgcagggcttcgtggtgggcttcaagggctccaagatcttctgcttg cattacgtgtccatgcagacgatcgatgtgccacagtcggcctccatgtaccgctatctg gagcgcaaggactttgagtcggcgtaccgtgtggcgtgtctgggtgtcacggaggcggac tggaagcaactggcgctggaggctctgcaggcgttgaacctggatgtggcccgcaaggcc tttatccgcatccgcgacgtgcgtttcgtggagctggtgaaccgcacggaagcgggtcgc aaggggggtaccagcgagcagctgctgctggcggagatcatggccttccagggccggtac caggaggcggccaggctgttcacgcaagctggttcggtggacaaagcgatggagatgttt tctgacctgcgccagttcgatgaggccaagaagtgggcggaggagtttgccgccagcggc cgcggcgaccagcgcagcgtacaggagctcattaaccggcaggcggaatggagcgaggag gtcaagaactacgacgccgctgcggagatgtacatcaaggccaagaagtacgatcgcgcc attgccatcctggccaagcaccaatggtgggacaagctcatcggggtggtcaggcagctg gacaagaccgacgcgcgctgtctgggcatgtgtgccgggcacttccgccgggcgtcgaac tttgcatatgccaaggagaccttgctcaagatggacgataccaagggccttatcacgtta tacgtggaggctgagaagtgggacgacgcgttcctcttgctgcacgcgcatcccgagtgc cgccaggacgtctacctgccgtacgccaagtggctcagcagccaggacaggtttgacgag gcccgccttgcttaccaggagggcggcttcccctccctcgccacccgcatcctggagcag ctgtgcggcaatgcggtggtggagtccaggttctcagacgccgccttctactactaccag ctggcgatggaggcgctcaagagcatcaagaacccgccgtccgccatgtcgccctcggat cgcaccgccctggagcgcttcacggagctgtacgaccgcgccgaggtgtactacgcgtac gacattgtgcacaagagcgtgcactcgcccttccgaacgacacaccccgacacgctgttc aacgcctcgcgcttcctgttgatgcgcactttgcccccccgggaggtgcctctgggggtc agtgtcgtcaacattgtgtacgtcatggcgaagcaggctgtggaggctggtgccttcaag ctggctcgcttcgcctacaacaagctgcagacgctggtgctccccgcggcttggcaggcg gaggtggacctggcctccgtggtcatccgatcaaagccgttttccgacaaggaggacctg ctgccggtgtgctggcgctgcaccaccaccaacccgctgctcaacacgcagggcgactac tgcatcaactgcggggcgcccttcatcaggtcgtttgtcactttcgagcacctgcccgtc gtggagtttgagctggagccgggcattgaggatgacgatgcgcagcggctgctgggagag gatgctgggttggaggcggcaaggcgggagcagcgggctgcccggcaggctaaggctgcc gagatgggtggcaacgtgttacgattggaccaggacgaaatcaaccgcatggatgacgcc tttgcggctcagatgatggtgcccaacaccaccatccgcgtagatcgggccatgttgcgc cgactcaagaccgcggaggtgatggtccgcacctggcccaacccggtcatcccccgccag tacttccgcgtcatggacagcgaggtgccgctgtgctgcgggccctgcggccatttcttc gagcaggacgagtacgagatggccgccctggagcgcggctcggcgcctttcagccgcacg accgtgcggcccgagggcatggtgccgggcgatgacggcgacgacgacagccccgctccc ccaaccgctggcggcctcgcgcccacgagctcagtcgacgtctccataatcgacttttgc atggcgctgatatga

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