Volvox carteri f. nagariensis: VOLCADRAFT_107529
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Entry
VOLCADRAFT_107529 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K15083
DNA repair protein RAD16
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_107529
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
VOLCADRAFT_107529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
RING_XB3-XBAT31
OTU
zf-C2HC_2
Helicase_C
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
BUD22
Motif
Other DBs
NCBI-GeneID:
9620629
NCBI-ProteinID:
XP_002957108
JGI:
107529
UniProt:
D8UEM5
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MSMFGDACKRAAAASLCRTERKIAWNYRGLQLAPASTAAAEGEREAGSGRRFRQRVGGAA
SENGDGGNGSTGAMFVVGAAAAAAPPPPPKEIVGGQDGADDTESNDGNGGDGVGARCAAA
AGVAVAVRRSSDGGAAAAAAAPDSDVIMISSSSTAEAAGYGNDDVSDGNGDDDDDFVAEE
FPPPRRRQAAAAAAAKGLRGRGGGAQAAGGGAKAKAKPAARRKAASGARAASAASAAADL
AIADGGGCEGGGGDGGGGDGGGGSVALAAGTVDVAAAGVGVGGTAARKRKSRQTVQSAAE
TAVPAEEGGKARRRRTRAAVAAAAAASGEEESPKQKRRKPQSQKKKKEKEQQEEEEDEDD
DGDDEDDDDDDSDVVLVSEDEESEEDDVDADASLDAAANHARDMRDPPPELLMPLLPYQK
QFLAWAVRQVAGDADGAALREADIVLTTYSVIENEYRRFMLPNKVQCKYCSKRFYPERLK
VHLRFFCGPYAVKSEALSRAQRKEKKEKKYDNSRKMTKTVETEQQLQQQTRKRTRKTTGG
DGGGGGGGGGKGGLRNCNGKRGRGGTRTVAATGSGKYGEEEEEEEEEEEEGDGDFEPDEA
VEVEGEEEEEEEEVVSEEDDVVDLVSEQDEEQEEEEKRGGTRKRITSKKAASGKRGGGTV
KGGGKNGGGSVRQSGSRRSGSRGGSKGRDLAELAEREAEEMIEAAARAAPSRAQDASVLH
RVPWRRIILDEAHSIKDRRCSTAKAVFALQSKYKWALSGTPLQNRVAELYSLIRFLRFVA
NPIKAHGYSGRGRTALMLLKNRILPAILLRRTKVQCADDLALPPRTVLLRRDRFDELEED
YYQALYTQSQAQFGAYVDSGTLLNNYAHIFDLLIRLRQAVDHPYLVIYSATNNPATAAPA
AVNDNGGESGDGNAPSPDAVINTGAYGGCGGGMAIPICGLCHEEIEDGVVAACGHGFCRT
CVIDHVMLMDPWWNPAVEQQAQDRIHRLGQYKPITVVRFVIAGTIEERILKLQEKKQLVF
EGCSGVQGRTMAVHVLYGGRLRQITPVYLTALVVARQVASDRTTYSDAFLGMTNEAYCNW
IRQPYNWGGGIELSILAQAYGIEIAAWNIESRKEHVFGEESVCAGPRANPEDDETSYNPR
TKRGKMIIAAARKLPTRRLLLLIPMSQRRWQLTKQRVLQPPGRGPGAPKPQPRQPPPGGF
PDPMCFLDVQSSAKYPTHNRRLAEVKAWLLLPSRHGASGFKSACRPLVVFER
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtttggcgacgcctgcaagcgagccgctgctgcttccctgtgccgtacagag
cgcaagatcgcatggaattaccggggcttgcagctggccccggcttcaacagccgcagct
gaaggtgaacgggaagccggcagcggccgcaggtttcgacagcgggttggcggcgccgcc
agcgaaaatggcgacggcggcaacggcagcactggcgctatgtttgtggtgggagccgcg
gcggcggcggcgccgccgccgccgccgaaagagattgttggaggccaagatggagctgac
gacacggaatcgaacgacggcaacggtggtgatggggttggagcgagatgtgcggcagca
gctggcgtggcagtagctgtccggcgcagcagcgacggcggtgccgccgccgccgccgcc
gcgccggacagtgacgttataatgatatcttcatcctccacggcggaggccgccggatac
ggcaatgatgacgtcagcgacggcaatggcgacgatgacgacgacttcgtggctgaggag
tttccgccaccgcggcggcgacaggcggcggcggcggcggcggcgaagggtctccgcgga
cgtggcggcggcgctcaggccgctggcggcggagcgaaggcgaaggcgaagcctgctgct
cggcggaaggcagcctctggtgctcgtgccgcctccgccgcctccgccgccgcagatctc
gccattgctgatggtggcggctgtgaaggtggcggcggtgatggtggtggcggtgatggt
ggtggcggtagcgtggccttggcggcggggactgttgatgttgcggctgctggtgttggt
gttggtggtaccgctgcgcgaaaaaggaagagcaggcagaccgtgcaatcggcggcggag
acggcggtgccagcggaggagggggggaaggcgaggcggcggcggacgagggcggcggtg
gcggcagcggcggcggcgtctggggaggaggaaagcccgaagcagaagcggcggaagcca
cagtcgcagaagaagaaaaaggaaaaggagcagcaggaggaagaagaagacgaagatgat
gacggcgacgatgaagacgatgacgacgatgactcggatgtcgtactggtttcggaggat
gaggagagtgaggaggacgatgtcgacgccgacgcctccctggatgccgccgccaaccac
gcccgggacatgcgcgatccgccgccggagctgctgatgccgctgctgccgtaccagaag
caattcttggcgtgggccgtacgacaggttgcaggggatgcagacggcgctgctttacgg
gaggcagatatcgtactgacgacgtacagcgttatcgagaatgagtatcgcaggtttatg
ttgccgaacaaggtgcagtgcaagtactgcagtaagaggttctacccggagcgtctcaag
gtgcacttgaggttcttctgtgggccttatgcggtcaaatcggaggccctctccagagcg
cagaggaaggagaagaaagagaagaagtacgacaacagccgcaagatgacaaagacagtc
gagacggagcagcaactgcagcagcagacgcgaaaacgcacacgtaaaacaaccggcggc
gatggcggtggcggcggtggcggtggcggcaagggggggttgaggaactgcaacggcaag
cgaggtcgcggtggaacccgtacggtagcggcgacagggtccgggaagtacggcgaggag
gaggaggaggaggaggaggaggaggaggagggggatggcgactttgagcccgacgaggcg
gtggaggtggagggagaagaggaagaagaagaggaagaagtggtttcggaggaggacgac
gtggtggatctggtttcggagcaagacgaggaacaggaggaggaggagaagaggggtggt
acgaggaaacggattacgtccaaaaaggccgcctctggcaagcgaggaggcggcactgtc
aaaggcggcggcaagaatggcggcggatctgtacggcagtcgggtagccgtcgaagtggc
tccagggggggctccaaggggagggaccttgctgagctggctgagcgggaggcggaggag
atgatcgaggcggcggcgagggcggcaccaagtcgggctcaagacgcgtcggtgctacac
agagttccctggcggcggatcatcctggacgaggcccacagtatcaaggaccgtcgctgc
tccacagccaaggccgtattcgcactacagtccaaatacaagtgggccttatccggcaca
ccgttgcaaaaccgagtggcggagctgtacagcctcattcggtttctgaggtttgtggca
aaccccatcaaggcgcacggctacagtgggagagggcgtacggcactgatgctgctcaag
aaccggattttgcccgccattctgctacgccgtacaaaggtccaatgtgcggatgatctg
gcgctgccgccccgtaccgtactgcttcgacgcgaccgcttcgacgagctggaggaggac
tactaccaggcgctatacacgcagagtcaggcccagttcggcgcttacgtggatagtggc
acgctgctgaacaactacgcgcacatcttcgacctgctcatccggctgcgccaggccgtg
gaccacccttacctggtgatctactctgccacaaacaatcccgctacggcggcaccggcg
gcggtcaatgacaatggcggcgaaagtggagacggcaacgcaccatcgccggatgccgtg
atcaacaccggcgcgtacggaggctgcggcggcggcatggccattccgatttgcgggctg
tgccacgaggagattgaggatggggtggtggcggcgtgtggccacgggttttgccgtaca
tgcgtcattgatcacgtcatgcttatggacccctggtggaaccccgctgtggagcagcag
gcgcaagacaggatccatcgcttggggcagtacaaacccataaccgttgtccgattcgtt
atcgcgggaaccatcgaggagcgcatcctcaagctgcaggagaagaagcagctggtgttc
gaggggtgctcgggagtgcaggggaggaccatggcagtgcatgtgttgtacggcgggaga
ttgcggcagataactcctgtctatttaacagcattggtggtggctcggcaagtggcaagt
gatcggaccacatattcggatgccttcctgggcatgacgaatgaagcgtactgcaactgg
atacgacaaccgtacaactggggcggcggtatcgagctttccatcctggcgcaggcgtac
ggcattgagattgccgcctggaacatagagagccgtaaggagcacgtgtttggagaggag
tcggtgtgtgcggggccgcgggcgaatccggaagatgacgagacgtcgtacaacccgagg
accaaacgcggcaaaatgatcattgcggcagcacggaaactgccgacacggcggctgcta
ctgctgatccccatgtcgcagcggcggtggcagctgacaaagcagagggtgctacagccg
ccggggcgggggccgggggctccgaaaccccaaccgcgacaaccgcccccggggggattt
cccgacccgatgtgtttcttggatgtccagtcctccgccaaataccccacacacaacagg
cggctggcagaggttaaggcctggcttctgctcccgtcgcgtcacggcgcgtccgggttc
aaatccgcctgccgacctctcgtggtgtttgagaggtga
DBGET
integrated database retrieval system
