Volvox carteri f. nagariensis: VOLCADRAFT_83674
Help
Entry
VOLCADRAFT_83674 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VOLCADRAFT_83674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_83674
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
VOLCADRAFT_83674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TsaE
AAA_29
AAA_28
VapE-like_dom
nSTAND3
AAA_23
ORC-CDC6-like
AAA_25
RsgA_GTPase
AAA_30
SRP54
NACHT
Arf
AAA_15
AAA_24
Motif
Other DBs
NCBI-GeneID:
9619824
NCBI-ProteinID:
XP_002956568
JGI:
83674
UniProt:
D8UD56
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MTQQPEPSTSAAATAPGSIEVRHLSFAYPGLDGRPIPGIPPLLKNLSFSLAPGTTCLLLG
ANGAGKTTFLKILAGKHMVSEESVRVLGRPPFHDTALTVCGDLSYIGGNWQRDIAFAGTS
VPLTGDFPASYMIDSIPGVDPERKARLIKARRDVLDIDPTWRMHTVSEGQRRRVQICVGL
LKPFKVLLLDEITVDLDVLGRADLMRFLKEECESRGATIIYATHIFDGLEFWPSHIAYLA
NGQLRLLPARDVPELAQGRLLSLVHRMLLEDRNAQLKARGPRPVEWDPTREGEVGNFSYA
FNNGWVPGTLSSSLSSNAVMRG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcagcctgagccaagcaccagcgccgcggcgacagctcctggcagcatcgag
gttcgccatctgagctttgcttacccaggactagatggtcgccccatcccgggaatcccg
ccacttttgaagaacctttccttctcgctcgctcccggcaccacttgcttgttgctggga
gccaacggcgccggcaaaacaacttttttgaaaatcttggcgggaaaacacatggtgtct
gaggagtcagtccgggtactggggcggccgcccttccacgataccgctctcaccgtctgc
ggtgacctgtcgtatattggcggcaactggcagcgcgacattgcgtttgcaggcactagt
gtgccgctcacaggcgacttcccagcgtcgtacatgattgactccatcccgggcgtggat
ccagagcggaaggcccgtctgatcaaggcgcgtcgggatgtgctggacatcgaccccacc
tggcggatgcacacggtttcggagggccagcggcgtcgcgtgcaaatctgcgtgggattg
ctgaagccctttaaggtgcttctgctggacgagattacggtggatttagacgtgctggga
cgagctgacctgatgcgctttcttaaggaggaatgtgagagtcgcggcgccaccatcatc
tacgccacccacatttttgatgggctggagttctggccctcccacatagcctacctcgca
aacggtcagctcaggctcctccctgcacgtgacgtaccagagctggctcagggccggctg
ctgtcgctcgtgcaccggatgctgctggaggaccggaacgcgcagctcaaggcacggggt
ccgcggccggtggaatgggatcccacgcgcgagggcgaggtgggcaatttctcctacgcc
ttcaacaacggctgggtgccgggcacgttgtcttcctctctgagcagtaatgcagtcatg
cgggggtga
DBGET
integrated database retrieval system