Vescimonas coprocola: MM50RIKEN_12050
Help
Entry
MM50RIKEN_12050 CDS
T07634
Name
(GenBank) hypothetical protein
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
vcop
Vescimonas coprocola
Pathway
vcop00550
Peptidoglycan biosynthesis
vcop01100
Metabolic pathways
vcop01502
Vancomycin resistance
vcop02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MM50RIKEN_12050
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MM50RIKEN_12050
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MM50RIKEN_12050
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcop01002
]
MM50RIKEN_12050
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcop01011
]
MM50RIKEN_12050
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
vcop01504
]
MM50RIKEN_12050
Enzymes [BR:
vcop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
MM50RIKEN_12050
Peptidases and inhibitors [BR:
vcop01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
MM50RIKEN_12050
Peptidoglycan biosynthesis and degradation proteins [BR:
vcop01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
MM50RIKEN_12050
Antimicrobial resistance genes [BR:
vcop01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
MM50RIKEN_12050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
DUF6479
LDL
INV_N
Peptidase_M15_4
Motif
Other DBs
NCBI-ProteinID:
BCK81442
UniProt:
A0A810Q5A8
LinkDB
All DBs
Position
complement(1243960..1244826)
Genome browser
AA seq
288 aa
AA seq
DB search
MSDYYDQTPEQRRQLRAQRNRRRQAQVRRRKLLLGLLVLAVLAVVLILVLRGCGKDKEPA
QPTPSENVDKPDTPNTPAEPSDREQNQKPDDQQSNGEQEIPWNLTLVNRWNPLPEGWTVD
EVELSNGWAVDSRCYDALQQMMDACRAEGLHPVVCSAYRTQAVQQNIFDQMKQSLLDQGY
SDADAETEAGRQVAVPGTSEHQLGLAVDIVDLDHQLLDESQEQTAVQQWLMTNSWRYGFI
LRYPTAKTETTGIIYEPWHYRYVGQEAAAEIYQQGVCLEEYIAAKYGA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactattacgatcagaccccggagcagcgccgtcagctgcgggcgcagcggaat
cggcggcggcaggcgcaggtgcgtcggcggaagctgctgctgggcctgctggtgctggcg
gtattggctgtggtgctgatactggtgctgcggggctgcggcaaggataaggaaccggcg
cagcctacccccagcgagaatgtggacaagcccgataccccaaacactccggcggagcct
tcggatagagagcagaaccagaagcctgacgaccagcagagcaacggggagcaggagatc
ccgtggaatctgacgctggtgaaccggtggaatcccctgccggagggctggaccgtggac
gaggtggagctctccaacggctgggcggtggacagccgctgctacgacgccctccagcag
atgatggacgcctgccgggcggaggggctgcatcccgtggtgtgctcggcctaccggacg
caggccgtgcagcagaacatcttcgaccagatgaagcagtccctgttggatcaggggtac
agcgatgccgacgccgagacggaggcgggccgtcaggtggccgttcccggcaccagcgag
catcagctggggctggcggtggatatcgtggatctggatcaccagctgctggacgagagt
caggagcagacggcggtgcagcagtggcttatgaccaacagctggcgctacggcttcatt
ctgcgctatcccaccgccaagacggagaccaccggcatcatctatgagccgtggcactac
cgctatgtaggacaggaggccgctgcggagatctatcagcagggtgtgtgcctggaggag
tatatcgccgccaaatacggtgcttga
DBGET
integrated database retrieval system
