Vescimonas coprocola: MM50RIKEN_21440
Help
Entry
MM50RIKEN_21440 CDS
T07634
Name
(GenBank) hypothetical protein
KO
K18138
multidrug efflux pump
Organism
vcop
Vescimonas coprocola
Pathway
vcop01501
beta-Lactam resistance
vcop01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vcop00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MM50RIKEN_21440
01503 Cationic antimicrobial peptide (CAMP) resistance
MM50RIKEN_21440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcop02000
]
MM50RIKEN_21440
01504 Antimicrobial resistance genes [BR:
vcop01504
]
MM50RIKEN_21440
Transporters [BR:
vcop02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
MM50RIKEN_21440
Antimicrobial resistance genes [BR:
vcop01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MM50RIKEN_21440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MTR4-like_stalk
Occludin_ELL
Motif
Other DBs
NCBI-ProteinID:
BCK82381
UniProt:
A0A810QA09
LinkDB
All DBs
Position
complement(2207851..2211750)
Genome browser
AA seq
1299 aa
AA seq
DB search
MVKFSVKKPLTVFVAVLAVLVLGVVAYLKMTPDLLPNMDFPYVVIVTTDPGASPEAVESA
VTRPMEQSMSTLDQIKSVTSTSQDSVSMVVLEFEDGVNMDTVSVDIQQKINILQGSWDDG
VGTPYVLKINPSMLPVQVAAVSYSGKDVTELSDFVENTLTQKLEGISGVASVTVSGTVQR
QAHIILSQEKLDALTATLREAIGKTLDETASQLEGTRSQLESAKGAIRSTEESAVREAAM
QALTAVQQSLTTLRSSESRLEANLKELAEIQALKVQLDAKNAVYQARMEAIRQDDSLTEE
EKAEQLAAIENDPEYIQLQADLAELELRIAALNTSWEQAAEDARRWRETLEQLKEQIRRL
EDDSEVASIADEVTSGVITMADGVTQLLSANVQLDSALTQLEQGLRTLESSRASALEQAD
LSGALNIQTITALLTAQNFSMPAGYLQENGVNYMVSVGDSISSRQELSDMVLFDLGLEGV
EPVKLSDVAEIVVTDNSDEIYAKLNGDNGVIVSFNKQSAYATAEVSDNIQARCDTLEKEY
DGLHFVPLMDQGDYIYIIINSILSSLGWGALFAVLILYLFLKDLRPTLITLCSIPVSVIF
AVVLMYFSGVTINMISLSGLAVAVGMLVDNSVVVIENIYRLRSKGATVIQAAVSGAAQVV
GAITASTLTTVCVFLPIVFVEGITKQLFTDLALTMTYSLLASLIVALTLVPAMASGMLKK
EKAVKAGLLERVYPAYRRAVGWSLGHKTVVLLLAVVLLAGSAWGAVSRGFVFMPQIDMNN
ISLTVTMPEGISREEAVALADEVVRRAGTVENVDAVGAMMSSGSGMDMSSMMGGSGGAYD
VTAYVTMPEGASGAKAGKAIKELCADLPCQVTASGSMDSMSTYLAGSGVSLKVYGDDMED
LQTSAKALAAALKTVEGTGEVSDGLEEATTVLHISVDRNAAMEKGVTVAQVYMAVASALT
NTSASSGLTLDGLEMEVSVQSPEESRMTREKLMDLEITPSSGTNLDSMSNISGMSGSTSS
MGGMSALAGGSTFSGGSALTDAAGQEVSSFRLGDVATIEETVSLGSIQREQQRRCVTVTA
EVAEGYNVTKVTAAAQTAVAGVDLPQGITARFSGENEAIMDAMGQLLLMLGLGVLLVYLV
MVAQFQSLRSPLIVMFTIPLAFTGGFLALLISGIELSVVSLIGFVMLVGVIVNNGIVLVD
YINQLRLSGMERREAIVEAGVTRLRPILMTSMTTVLGLVVMAFGGDAGTALMQPVALVCI
GGLLYATLMTLLVVPCMYDLLSRRELRKVEETDLQTLDI
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaattcagcgtgaaaaagccgctgactgtctttgtggcggtgctggctgtgttg
gtgctgggcgtggtggcgtatctgaaaatgacgccggacctgctgcccaacatggatttc
ccctatgtggtcatcgtcaccaccgaccccggtgccagcccggaggcggtggagtccgcc
gtcacccggcccatggagcagtccatgtccacgctggatcaaatcaagtccgtgacctct
acctcgcaggacagcgtctccatggtggtgctggagtttgaggacggcgtgaacatggac
accgtcagtgtggatatccagcagaagatcaacatcctgcaaggctcttgggacgacggc
gtcggcaccccctatgtgctgaagatcaacccctccatgctgccggtgcaggtggcggcg
gtgtcgtacagcggcaaggatgtgacggagctgtcggattttgtggaaaacaccctcacc
cagaagctggagggcatctccggcgtagccagcgtcaccgtcagcggcacggtgcagcgg
caggcccatatcatcctcagtcaggagaagctggacgccctcaccgccacgctgcgggag
gccatcggcaagacactggacgagacggccagccagctggaggggacccgcagccagctg
gagagcgccaagggggccatccgctcgacggaggagtccgccgtccgggaggccgccatg
caggccctgaccgccgtgcagcagtctctgaccaccctccgcagcagcgagagccggctg
gaggcgaacctgaaggagctggcggagattcaggcactgaaggtgcagctggatgccaaa
aacgccgtctatcaggcccggatggaggccatccggcaggacgattccctgacggaggag
gagaaggcggagcagctggccgccatcgaaaacgacccggagtacatccagctgcaggcg
gaccttgcggagctggagctgcgaatcgccgcactgaacacctcgtgggagcaggcggcg
gaggacgccagacggtggcgggagacgctggagcagctaaaagagcagatccgccggctg
gaggatgattccgaggtggcctccattgccgatgaggtaacatcgggagtcatcaccatg
gccgatggcgtcacccagctcctctctgccaatgtgcagctggacagcgccttgacccag
ctggagcagggtctccggacgctggagtcctcccgtgcctcggcgctggagcaggcggac
ctctccggggctctgaacatccagaccatcaccgccctgctgacggctcagaacttctcc
atgcctgccgggtatctgcaggagaacggtgtgaactacatggtttccgtgggcgacagc
atctcctcccgtcaggagctgtcggacatggtgctctttgatctgggtctggagggcgtg
gagccggtgaagctctccgacgtggcggagatcgtggtgacggataactccgatgagatc
tacgccaagctcaacggcgacaacggcgtcatcgtctccttcaacaagcagtctgcctac
gccacggcggaggtgtccgacaacattcaggcccgctgcgacacgctggagaaagagtac
gacggcctgcacttcgtgccgctgatggatcagggggactacatctatatcatcattaac
tccatcctgtcctccttgggctggggcgctctgtttgcggtgctgatcctgtacctgttc
ctgaaggacctgcggcccaccctcatcaccctctgctccatccccgtcagcgtgatcttc
gccgtggtgctgatgtacttctccggcgtcaccatcaatatgatctccctttcgggtctg
gcggtggcagtgggtatgctggtggataactccgtggtggtcatcgagaatatctaccgg
ctgcgctccaagggagccaccgtcattcaggcggcggtgtccggtgcggcgcaggtggtg
ggggccatcaccgcctccaccctgaccacggtgtgcgtgttcctgcccattgtgttcgtg
gagggcatcaccaagcagctgttcaccgatctggccttgaccatgacgtattctcttctg
gccagcctcatcgtggccctgacactggtgccggccatggcctccgggatgctgaaaaag
gaaaaggccgtgaaggccggcctgctggagcgggtctatcccgcctaccgcagggcggtg
ggctggtcgctgggccataagaccgtggtactgctgctggcggtggtgctgctggctggc
tctgcgtggggtgccgtcagccggggcttcgtgttcatgccccagatcgatatgaataac
atcagcctcaccgttaccatgccggagggcatcagccgggaggaggcggtggcactggcg
gacgaggtggtgcgccgggccggtacggtggaaaatgtggatgccgtgggtgccatgatg
tcctccggcagcggcatggatatgagcagcatgatgggcggctccggcggtgcctatgat
gtcaccgcctacgtcaccatgccggagggggcctccggcgccaaggcaggcaaggccatc
aaggagctgtgcgccgacctgccctgtcaggtgacggcctccggctccatggacagtatg
tccacctatctggcgggcagcggcgtctctctgaaggtctacggcgatgacatggaggac
ctccagacctccgccaaggcgctggcggcggccctgaaaaccgtggagggtaccggcgag
gtgtccgacggtctggaggaggccaccacggttctccacatctccgtggaccgcaacgcc
gccatggaaaagggcgtcaccgtggcgcaggtgtatatggcggtggcctctgccctgacc
aacacctccgcctcctccggcctgacgctggatgggctggagatggaggtttccgtccag
tccccggaggagagccgcatgacccgtgaaaagctcatggatctggagatcaccccgtcc
agtggtacgaatctagacagtatgagtaacataagtggtatgagcggcagcacctcctcc
atgggcggaatgtctgcgctggcgggcggcagcacgttctccggcggcagcgccctgacg
gacgctgccggtcaggaagtgtccagcttccgtctgggcgacgtggccaccattgaggag
accgtcagcctcggcagcatccagcgggagcagcagcgccgctgcgttaccgtcacggcg
gaggtagccgagggctacaacgtcaccaaggtcacagccgccgcccagacggcggtggcc
ggggtagacctgccgcagggcatcaccgcccggttcagcggcgagaacgaggccatcatg
gatgccatgggccagctgctgctgatgctggggctgggggtgctgctggtgtatctggtg
atggtggcgcagttccagtcgctgcgctccccgctgatcgtcatgttcaccatcccgctg
gcctttaccggcggctttctggccctgctgatctccggcatcgagctgagcgtggtgtcc
ctcatcggctttgtgatgctggtgggcgtcatcgtcaacaacggcatcgtgctggtggac
tacatcaaccagctgcgcctgtcggggatggagcggcgggaggccattgtggaggccggt
gtcacccgtctgcggcccattctcatgacgtccatgaccaccgttctgggccttgtggtc
atggccttcggcggcgacgccggtacggctctgatgcagccggtggcgctggtgtgcatc
ggcggcctgctgtacgccaccctcatgacgctgctggtggtgccgtgtatgtatgacctc
ctcagccgccgggagctgcggaaggtggaggagacggacctgcagacgctggatatctga
DBGET
integrated database retrieval system