Vibrio crassostreae: IS519_05655
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Entry
IS519_05655 CDS
T08776
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vcra
Vibrio crassostreae
Pathway
vcra01501
beta-Lactam resistance
vcra01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS519_05655
01503 Cationic antimicrobial peptide (CAMP) resistance
IS519_05655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcra03036
]
IS519_05655
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcra02000
]
IS519_05655
01504 Antimicrobial resistance genes [BR:
vcra01504
]
IS519_05655
Chromosome and associated proteins [BR:
vcra03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IS519_05655
Transporters [BR:
vcra02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IS519_05655
Antimicrobial resistance genes [BR:
vcra01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IS519_05655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
NIL
PTS_EIIA_1
CSD2
Motif
Other DBs
NCBI-ProteinID:
UPR30778
LinkDB
All DBs
Position
1:complement(1267851..1268927)
Genome browser
AA seq
358 aa
AA seq
DB search
MKHKSVLTLLSLSILMASPAVLAKRMGPSTVTVVTEQVDIHQVSQSLSLVGKLEAEQSVM
ITSEVAGRVDSINIKANQDVTKGQMLVQLDDDKAKAAVAEAQAYLKDEQRKLAEFQRLVK
RNAITQTEIDAQKTNVEIANARLAAANANLKDLHISAPFSGTVGFIDFSRGKMVTAGTEL
VTLDDLSVMQLDLQIPERYLSKLSKGMKVTARTSAWGDTQFTGTVVGIDSRINAETLNLR
VRIHFDNNNDYLKPGMLVAADMDFPPVEAPIIPVQALEYSGTKRFVYVIDEDNKATRTEV
FLGARIDNEVVIDKGIEIGQKIVVQGIVNMRDGVLVQELAVNRPADATSDKKAQEGAN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaagcataaatctgttttaaccctgcttagcttgtctattcttatggcgtctccagcc
gtacttgctaagcgtatgggccctagcactgtcactgttgttactgagcaggttgatatt
caccaagttagccaatctctttcgttggtcggtaagttagaagccgagcaatcggtaatg
atcacttctgaagtggctggcagagtggactcaattaacattaaagccaatcaagatgtc
actaaagggcagatgttggttcagcttgatgacgacaaagcgaaagcggcggttgcagaa
gcgcaagcttatctaaaagacgagcaacgtaagctagcggaatttcaacgcctagtgaaa
cgtaacgcgatcacgcaaactgaaattgacgctcagaaaacgaacgtagagattgccaac
gctcgtttagctgctgcaaatgccaatctgaaagatcttcacatcagcgcgccattctcg
ggcactgttggttttatcgactttagccgcggtaaaatggtgacagcaggtactgaactc
gtaaccttagatgacctatcggtaatgcaattagatctgcagatcccggagcgctacctt
tctaaattgtctaaaggtatgaaagtaacggctcgcactagcgcatggggcgacactcag
ttcactggtactgtagtaggcattgattctcgtattaacgctgaaactttgaaccttcga
gttcgaatccacttcgacaacaataatgattatctaaagccaggcatgttagtggcagcg
gatatggacttcccaccagtggaagcgccaatcattccagttcaagcgcttgagtattca
ggtacgaagcgtttcgtttatgttattgacgaagataacaaagcaactcgtacagaagtt
ttccttggggcacgtattgataacgaagtcgtgatcgacaaaggcatcgaaattggccag
aagatcgtggtgcaaggtatcgtgaacatgcgtgacggcgtcttggttcaagagcttgcc
gttaatcgtccggctgatgcaacaagtgataaaaaagcacaagaaggcgctaactaa
DBGET
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