Vibrio crassostreae: IS519_08040
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Entry
IS519_08040 CDS
T08776
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00540
Lipopolysaccharide biosynthesis
vcra01100
Metabolic pathways
Module
vcra_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IS519_08040 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcra01005
]
IS519_08040 (lpxC)
Enzymes [BR:
vcra01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
IS519_08040 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
vcra01005
]
Lipid A
IS519_08040 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
UPR31204
LinkDB
All DBs
Position
1:complement(1809604..1810521)
Genome browser
AA seq
305 aa
AA seq
DB search
MIRQRTLKEIVKTTGVGLHSGRKVTLTLRPAAANTGIVYRRTDVNPPVDFPADPASVRDT
MLCTALVNDEGVRISTVEHLNAALAGMGIDNIIVEVDAPEIPIMDGSASPFVYLLQQAGV
ETLNAAKRFIRIKKPIRFEDGDKWAEFVPFNGFRMDFEIDFNHPAIESDEQRLLFDFSSQ
GFVKEISRARTFGFMRDIEYLQSQNLVLGGSFDNAIVLDEYRILNEEGLRFDNEFVTHKV
LDAIGDLYMCGHAIIGEFRAYKSGHGLNNQLLRAVLADAEAWEWATFEEEVGSPVAFAEP
GMVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacaacgtactctgaaagaaattgtgaaaacaactggtgtgggtctccactct
ggtcgtaaagtcacacttactcttcgcccggcagctgcaaatacaggtattgtttatcgt
cgtacagatgtaaatccacctgtagatttcccagctgatccagcgtcagttcgtgacact
atgctatgtacagcacttgttaatgacgaaggcgtacgtatctctacagtggaacacctt
aacgcagctttagcgggtatgggcatcgacaacattattgttgaagtagatgctcctgag
atcccaattatggatggtagcgcaagcccattcgtatacttgctacagcaagcgggtgta
gaaacactgaatgcagcgaagcgttttattcgtatcaaaaagcctatccgttttgaagat
ggcgataagtgggcagaatttgttccatttaacggtttccgtatggactttgagatcgac
tttaaccacccagcaattgaatctgatgagcaacgtttgttgtttgatttctcttcacaa
ggttttgtgaaagaaatttctcgcgctcgtactttcggcttcatgcgcgacattgagtac
ctacaatctcaaaacctagtacttggtggtagctttgataatgctatcgtactggacgaa
taccgaattcttaatgaagaaggtctacgttttgataatgagttcgtaactcataaagtt
ctagatgcgattggtgacttgtacatgtgtggacacgctattattggtgagttccgtgca
tacaaatcaggtcacggcctaaacaaccaactactacgtgcagtacttgctgacgcagaa
gcttgggaatgggcaacattcgaagaagaggtaggctctcctgttgcatttgctgagcca
ggaatggttctagcgtaa
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