Vibrio crassostreae: IS519_08730
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Entry
IS519_08730 CDS
T08776
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
vcra
Vibrio crassostreae
Pathway
vcra00270
Cysteine and methionine metabolism
vcra00450
Selenocompound metabolism
vcra00670
One carbon pool by folate
vcra01100
Metabolic pathways
vcra01110
Biosynthesis of secondary metabolites
vcra01230
Biosynthesis of amino acids
vcra04981
Folate transport and metabolism
Module
vcra_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
IS519_08730 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
IS519_08730 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IS519_08730 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IS519_08730 (metH)
04980 Cobalamin transport and metabolism
IS519_08730 (metH)
Enzymes [BR:
vcra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
IS519_08730 (metH)
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GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UPR28334
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Position
1:complement(1973705..1977382)
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AA seq
1225 aa
AA seq
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MGSNVRQKIDALLKQRILLIDGGMGTMIQDYKLEEQDYRGERFADWHSDLKGNNDLLVLT
QPKLIKDIHSEYLEAGADILETNTFNATTIAMADYDMESLSEEINFAAAKLAREAADEWT
AKTPDKPRFVAGVLGPTNRTCSISPDVNDPGYRNVSFYELVEAYSESTRALIKGGSDLIL
IETIFDTLNAKACAFAVESVFEEVGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVK
PISFGLNCALGPDELREYVGEMSRISECNVSAHPNAGLPNAFGEYDLSPEDMAEHVKEWA
ESGFLNLIGGCCGTTPEHIREMAEAVEGVTPRQLPDLPVSCRLSGLEPLTIAKESLFVNV
GERTNVTGSARFKRLIKEELYDEALSVAREQVENGAQIIDINMDEGMLDAEACMVKFLNL
CASEPEISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFVEQAKLVRRYGAA
VIVMAFDEVGQADTRERKVEICTNAYNILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYA
VDFIEAVGDIKRDLPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKNGMDMGIVNA
GQLEIYDNVPEDLRDAVEDVVLNRRDDSTERLLDMATEYLERAVGKVEDKSALEWRTWPV
EKRLEHSLVKGITDFIVEDTEEARVNASRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVV
KSARVMKQAVAHLEPFINASKEVGATNGKILLATVKGDVHDIGKNIVGVVLQCNNYEIID
LGVMVSCEKILKVAKEENVDIIGLSGLITPSLDEMVHVAKEMERQGFKLPLLIGGATTSK
AHTAVKIEQNYSEPVVYVNNASRAVGVCTSLLSDELKPAFVEKLDIDYDRVRDQHNRKKP
RTKPVTLERARANKVAIDWDAYTPPAPAKPGVHIFNDFDVATLRQYIDWTPFFMTWSLVG
KYPAILDHEEVGEEAKRLFKDANDLLDRVEKEKLLEARGMCAMFPANSVGDDIEVYTDES
RTEVLKVLHNLRQQTEKPKGFNYCLSDYIAPKESGKADWIGGFAVTGGIGERELADEYKA
KGDDYNAIMIQAVADRLAEAFAEYLHKEVRKDIWGYSPDEDLSNDDLIREKYQGIRPAPG
YPACPEHTEKGTLWELMDVEKAIDMSLTTSYAMWPGASVSGMYFSHPDARYFAIAQIQQD
QVDSYADRKGWDMLEAEKWLGPNIN
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
gtgggaagtaatgtaaggcaaaagattgacgctctgttgaagcaacgaattttactgatt
gatggtggcatgggcaccatgattcaggattataaattggaagagcaagactatcgtggt
gaacgctttgctgattggcacagtgacttaaagggcaacaatgaccttttagttcttaca
cagcctaagcttatcaaagatatccattcagaatacttggaagctggggctgacatcctc
gaaaccaatacctttaacgctacaaccatcgctatggccgattatgatatggaaagcctt
agtgaagaaattaactttgctgctgccaagcttgctcgtgaagcggctgatgaatggacc
gcaaagaccccagataaacctcgcttcgtagcgggtgtattaggccctaccaaccgaact
tgttctatatcccctgatgtaaacgatccaggttaccgtaatgttagcttttacgaactg
gttgaagcttattctgaatcgactcgcgcgctcattaagggcggttcagatttaattctt
attgaaactatctttgatacgttaaacgcgaaagcgtgtgcttttgcggttgaatctgtt
ttcgaagaagtaggtatcagtctgccagtgatgatttccggtaccatcactgatgcatca
ggtcgtaccctttcaggacagacgacagaagcattctacaacgcccttcgtcatgtaaaa
ccaatctcatttggattgaactgtgcattgggccctgatgaactgcgtgagtatgtcggt
gagatgtctcgtatctcagagtgcaatgtttctgctcaccctaatgcgggtttgcctaat
gcatttggcgagtatgacctttctcctgaggatatggctgaacatgttaaagagtgggct
gaaagtggcttcttgaacctaattggtgggtgttgtggtactactccagagcatatccgt
gaaatggctgaggccgttgaaggtgtaacgccgcgtcaattgccagacttaccagtttct
tgtcgtctttcgggactagagccactgacgatagctaaagaatctttgttcgtgaatgta
ggtgagcggaccaatgttaccggctctgcacgctttaagcgccttatcaaagaagagctc
tacgacgaagccttgagtgtagctcgagagcaagtcgagaatggtgctcaaattatcgat
atcaacatggatgaagggatgctagacgccgaggcgtgtatggttaaattcctgaatcta
tgtgcttcagaacctgaaatctcgaaagtacctgttatggtcgattcttctaagtgggaa
gttatcgaagctggcctaaagtgtattcaaggcaaaggcatcgttaactcaatctctcta
aaagaaggcaaagagaagtttgttgagcaagccaaattagttcgtcgttatggtgctgct
gtcatcgtgatggcgtttgatgaagtcgggcaggctgatactcgagagcgtaaagtcgaa
atctgtaccaatgcctacaacattcttgttgatgaagtcggtttcccaccagaagatatt
atttttgacccgaatattttcgcagtggctactggtatcgatgagcataataactatgcg
gttgatttcattgaagcagtaggagacatcaaacgcgatctcccgcatgcgatgatctct
ggcggtgtgtcgaatgtttcattctcattccgtggtaataactacgtccgtgaggctatt
cacgcggtattcctatatcactgttttaaaaacggtatggatatgggcattgtaaacgct
ggtcagttggaaatttacgataatgttccagaagatctgcgtgatgctgttgaagatgtc
gtactaaaccgtcgtgatgattcgactgaaagattgctggatatggcgaccgaataccta
gagcgtgctgttggtaaggttgaagataaatctgcattagagtggcgaacttggcctgta
gagaagcgtttggagcactctttggtaaaaggtatcaccgactttattgttgaagatacc
gaagaagctcgtgttaatgcctctcgtcctattgaagtgattgaaggtcctctaatggac
ggaatgaacgttgttggtgacctgtttggtgaaggtaagatgttcttaccacaggttgta
aagtctgcgcgtgtgatgaaacaggcggttgcccatttagaaccattcattaatgcatcc
aaagaagtgggcgcaactaacggtaagattttgttagcgaccgttaaaggtgacgttcac
gatatcggtaaaaatatcgttggtgttgtcttgcaatgtaataactacgaaattatcgac
ttaggtgtgatggtttcttgcgagaagattctcaaggtagcgaaagaagagaatgtcgac
attattggcctgtctgggctgattacaccgtctcttgatgaaatggtacatgttgctaaa
gaaatggagagacagggtttcaagctgcctcttctgattggcggcgcaaccacatctaaa
gctcacacagcagttaagattgagcagaattattcagaacctgttgtatacgtaaataat
gcctcgcgtgcagtgggtgtttgtacttcactactttctgatgaattgaaacccgctttc
gttgagaagctggatatcgattacgatcgcgttcgagatcagcacaatcgtaagaaacct
cgtaccaagcctgtcacgcttgaaagagctcgtgccaataaagttgctatcgattgggat
gcgtatacgccaccggcacccgctaagccgggagttcacatcttcaatgattttgatgtg
gcgactttgcgtcagtacatcgattggactccattctttatgacatggtcattggttggt
aaataccctgcaatccttgatcatgaagaagtgggtgaagaggcaaaacgtttattcaaa
gatgctaatgatttactggatcgcgtagagaaagagaagctgcttgaagcgcgtggtatg
tgtgccatgttcccagcgaacagtgttggtgatgatattgaggtgtataccgatgaatct
cgtaccgaagttctaaaagttctacacaatcttcgtcaacaaacagagaaaccaaaaggc
tttaactactgtttgtctgattacattgcgccaaaagaaagcggtaaagcggattggatt
ggtggctttgcggtgacgggtggtattggtgagcgagagttggctgatgaatacaaagcg
aaaggcgatgactacaacgcaatcatgattcaggcggttgctgaccgattggctgaagcg
ttcgcggagtatctgcataaagaagtgagaaaggatatttggggttactcgccagatgaa
gatttgtctaacgacgatttgattcgagagaagtaccaaggtattcgtccagctcccggt
taccctgcttgccctgagcatacagagaaaggcacgttgtgggagttgatggatgttgaa
aaggcaatcgatatgtcattaacgacaagctacgcgatgtggcctggtgcttcagtatct
ggtatgtacttctcacaccctgatgctagatactttgctattgcacagattcaacaggat
caagtggatagctatgctgaccgcaaaggttgggacatgttagaagccgagaagtggtta
ggtccaaacattaactag
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