Vibrio crassostreae: IS519_10135
Help
Entry
IS519_10135 CDS
T08776
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vcra
Vibrio crassostreae
Pathway
vcra01501
beta-Lactam resistance
vcra01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS519_10135
01503 Cationic antimicrobial peptide (CAMP) resistance
IS519_10135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcra03036
]
IS519_10135
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcra02000
]
IS519_10135
01504 Antimicrobial resistance genes [BR:
vcra01504
]
IS519_10135
Chromosome and associated proteins [BR:
vcra03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IS519_10135
Transporters [BR:
vcra02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IS519_10135
Antimicrobial resistance genes [BR:
vcra01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IS519_10135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
OEP
Biotin_lipoyl_2
Biotin_lipoyl
TarH
Motif
Other DBs
NCBI-ProteinID:
UPR28566
LinkDB
All DBs
Position
1:2273273..2274379
Genome browser
AA seq
368 aa
AA seq
DB search
MKKWTFFMLLIAVLLFGSVIGFNMFKQQKIAEYMANRPEPEFPVTVTEVQPIDWVPVIEA
IGFIEPNQGVTLANETSGVIDQISFESGTDVKNGQQLVRLDSDVEKANLKSSEARLPAAK
AKYKRYQGLFKKGSISKEAYDEAEANYFSLSADIESLKASIERREIRAPFDGTVGIRNVY
LGQYLQSGTDIVRLEDTSVMRLRFTVSQTDISRINVGQAIDIFVDAYPETPFEGSISAIE
PAVSIQSGLIQVQADIPNNDGKLRSGMFARANIILPKLENQVTLPQTAITFTLYGDNVYI
LTEEDGVQRVAQHVVKVGERTADIAHILEGVKAGDTVVTSGQVRLSNGAKVKVVESDAIT
PPSETPKL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtggactttcttcatgttactcatcgctgtactacttttcggcagcgttatt
gggtttaacatgttcaaacaacaaaaaattgctgagtatatggccaaccgccctgaacca
gagtttccagtaacggtaactgaagttcagccgatcgactgggttccagtgattgaagct
atcggcttcatcgaacctaaccaaggtgtgacactagcgaacgaaaccagcggtgttatt
gaccagatctctttcgagtcaggtactgatgttaagaatggtcagcaactggtacgtctt
gattctgacgtagagaaagcaaacctaaagagttctgaagctcgcttgcctgctgcgaaa
gcaaaatacaagcgttaccaaggtctattcaagaaaggttctatctctaaagaagcgtac
gatgaagcagaagcgaactacttctctctatctgctgacattgaaagcctaaaagcatcg
atcgagcgccgtgaaattcgcgcgccattcgacggtactgttggtattcgtaatgtatac
ctaggccaatacctacaatcgggtaccgatatcgttcgtttagaagataccagtgtcatg
cgcctgcgcttcacggtttctcaaactgatatctctcgtatcaatgttggtcaggctatc
gacatctttgttgatgcttacccagagacaccgtttgaaggctctatcagtgcaattgaa
cccgcagtaagcatccaaagtggtcttatccaagttcaagcagacattccaaataatgat
ggcaagcttcgtagcggtatgttcgctcgcgctaacatcattctgcctaaactagagaac
caagtaactctgcctcaaacagcgattactttcactctatacggtgacaatgtttacatc
ctgactgaagaagacggcgttcaacgtgttgctcaacatgttgtaaaagtaggtgagcgt
acagctgatattgcacacatccttgaaggcgtaaaagccggcgatacagttgtaacttct
ggccaagtacgtctaagtaacggtgccaaagttaaggttgttgaaagtgatgcaatcact
ccaccatctgaaacacctaagctgtaa
DBGET
integrated database retrieval system
