Vibrio crassostreae: IS519_20040
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Entry
IS519_20040 CDS
T08776
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vcra
Vibrio crassostreae
Pathway
vcra01501
beta-Lactam resistance
vcra01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS519_20040
01503 Cationic antimicrobial peptide (CAMP) resistance
IS519_20040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcra03036
]
IS519_20040
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcra02000
]
IS519_20040
01504 Antimicrobial resistance genes [BR:
vcra01504
]
IS519_20040
Chromosome and associated proteins [BR:
vcra03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IS519_20040
Transporters [BR:
vcra02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IS519_20040
Antimicrobial resistance genes [BR:
vcra01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IS519_20040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
UPR32823
LinkDB
All DBs
Position
2:830277..831500
Genome browser
AA seq
407 aa
AA seq
DB search
MLYEFDLLAVSIDRMTRLKKQGEHMSKYKGVIVGSALFILLSFVFGFHYVKGEMIKEKVA
NFKLPAISVTTEKVNQDTWDKSLKVIGNIHSNQSIDVTSQMSGQVKEILFTSGQQVNKGD
VLVKLDDALLKSNYKSQLSKVELVRVELMRNKLLLRNNSVSKNSVDKLQAQFNAEGAKLE
YIATQIDYMKVKAPFSGSVGIRNIDVGDFINSSTAIVKLEDKSKQYVDFSIPELYLHDVK
VGQDLQFYSEATNDEVFHGTISAIEPSSDSNTHNIELRAMANQAVPLEAGMYVDATLITS
ESDTIVAVPSVAISYTLYGNTVFVLDTSTKKASEHSSNDASPFYEYKVVQRTVEVGPKQG
GYVGVVSGLKEGDVVVTSNQHQLKNSGWVLVNNQHPLITDKSTKQSN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgttatatgagtttgatttattggcagtgtcgatagatagaatgaccagacttaaaaaa
caaggtgaacacatgagtaagtataaaggcgttattgtcgggtcagctctttttatatta
ctgtcttttgtatttggctttcattatgtaaaaggtgaaatgatcaaagagaaggtcgct
aattttaaattgccagctatatctgtaacaacggaaaaagtaaatcaagatacttgggat
aaaagtttaaaagtcattggtaacattcattctaatcaatctattgatgtgacgagccaa
atgtctggccaagtaaaagagattctctttacttcaggtcagcaagtaaataagggtgat
gttcttgttaaattggatgatgcgttattgaagtccaactataagagccagctatccaaa
gttgaattggtaagagtcgaattgatgagaaataaattgctccttagaaataacagtgtt
tcaaaaaactcggttgataagctacaagctcaatttaatgctgaaggtgcaaagctggaa
tatattgctacgcaaatcgactacatgaaagtgaaagcgccattttctggcagcgttggg
attcgtaatatcgatgtgggtgactttattaattcaagtacagcgattgtcaagctggaa
gacaaatcaaagcaatatgtcgatttctctattccagagctttatttacacgatgtgaag
gtagggcaagatttacagttttattcagaagcaacgaacgacgaagtctttcacggcacg
atttctgccattgaaccgagctcagacagcaacacgcacaatatcgaattgagagccatg
gctaaccaagctgtgccgttagaagcgggtatgtatgtcgacgctacgttaatcacatcg
gaatcggacactatcgtggcggtaccttctgttgcgatcagttacaccttatatgggaac
accgtgtttgtgttggatacgtcgactaaaaaggccagcgaacattcgagcaacgatgca
tcaccattttacgagtacaaggttgtgcagcgcactgttgaagtcggccctaaacaaggt
ggctatgttggcgtggtttcgggcttgaaagagggggatgtggttgtgacttcaaaccaa
caccaactcaagaatagtggatgggttctggttaataaccaacatccgctgattactgac
aaaagtactaagcaaagtaactag
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