Vibrio crassostreae: IS519_20645
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Entry
IS519_20645 CDS
T08776
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
vcra
Vibrio crassostreae
Pathway
vcra01501
beta-Lactam resistance
vcra01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS519_20645
01503 Cationic antimicrobial peptide (CAMP) resistance
IS519_20645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcra02000
]
IS519_20645
01504 Antimicrobial resistance genes [BR:
vcra01504
]
IS519_20645
Transporters [BR:
vcra02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IS519_20645
Antimicrobial resistance genes [BR:
vcra01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IS519_20645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Tape_meas_lam_C
Motif
Other DBs
NCBI-ProteinID:
UPR32929
LinkDB
All DBs
Position
2:971589..974666
Genome browser
AA seq
1025 aa
AA seq
DB search
MKLPEICIKHPVFASVLSITIVLLGLLSFQKLSIQYFPEHKTPSATVTAAINGASAEFMS
RNVADKLITAATGLDSVKTMTTDCQEGSCNLKIIFEDDINDVEYTSLMNNLRSSVEAIGD
FPPSMTDKPTVTDDSSDTSMPSNIITFVNTGKMSKQDMYDYISQQVVPQFKHIQGVGGIW
GPYGGSEKAVRVWLQPDRMMALNMSASDVVGTLSSYNATFTAGTIKGQVRDFSINPVNQV
TSVDDVRDLVVRVDNGKIIRIGDIAEVKMGEESLTPSILRVDDNLAMSIQVLPLKSENPV
TVANKVKKQIDLIQPQLPEGIEMKMVYNQADFIKTAIDEGFMTLVEAIVLVSAVVVLFLG
SFRVASIPIITIPVCVIGVFAVMHLLGFSINVLTILAIILAIGLVVDDAIVVAENCYRHI
EEGETPFNAAIKGCREIVFPVIAMTLTLAVVYLPIGLMAGLTADLFRQFAFTLAAAVIIS
GFVALTLSPMMSAYLMKPVSTPAKWYQKVDAKLNVLSDLYTKELGKWFDRKALMSGIALV
LIALSALAVWKMPQVLLPTEDTGFVEVTSTPPTGVGRQYHLDNNEQLNSVFKGDSSVEAN
LSYIEGTPTNHVLLKPWGERDQSADELVNEFIAKAQSSVSAYGMSFKVRSADNLNIATNM
ILELTTVNRDTTVLSETASEVVKALEDYEGVTNIKNSMLRDQLRYDLSIDRNAIVLSGVD
YGNVTNALSTFLGSVKAADLQADDGYTYPIQVQVNRNDLGDFKVLDKLYVDSQSGQRLPL
SQFVSIKQVTSESNFKTFMGKDSAEITADLMPGYTASDVKAYIDDTVPSLLKPAQSYEFN
GIVKDLVDSTAGAQVLFVLALIFIFLILAAQFESFVDPMIILLTVPLCIVGAILTLSVFG
QSLNIYSKIGLLTLVGLVTKHGILLVEFANEKRKSGASAKEAAISSARSRLRPILMTSLT
MILGSLPLALADGPGSLGRINIGLVLVGGLTAGTFFSLFLVPVAYVGMANLKQMDILTRL
RTKPA
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcctgagatatgtatcaagcaccctgtgtttgcctcagttctgagtatcacc
attgttttgcttgggcttttgtcgtttcaaaagctctcaatccaatactttccagaacat
aaaacaccgtcagcaacggtaacggctgcgatcaatggcgctagtgctgagtttatgtcg
cgcaatgtggcagataagctcattaccgcagcaacgggcctcgacagcgtgaaaaccatg
acaacggactgtcaggaaggctcgtgtaatctaaaaatcatctttgaagatgacattaat
gacgtcgaatacaccagcttgatgaacaacctgcgcagcagcgtcgaagcgattggtgat
ttcccgccgagcatgacggataagccaacggtaacggatgactcttctgacaccagtatg
ccgagtaacatcatcacgtttgtgaatactggcaagatgtctaagcaagacatgtacgat
tacattagtcagcaagtcgtgcctcaatttaagcacatccaaggtgtgggtggtatttgg
ggaccgtatggtggcagcgagaaggcggtgcgtgtttggttgcaaccggatcgcatgatg
gcgctcaatatgagtgcatccgatgttgttggaacattgagctcatacaatgcaacgttt
accgccggtaccatcaaggggcaggtgcgagatttctccatcaacccagtcaaccaagta
accagcgttgatgatgtacgagacttagtggttcgtgttgataacggcaagatcattcgt
atcggtgatattgctgaagtcaaaatgggtgaggagagccttacaccaagtattctgcgt
gtagatgacaatctagcgatgtcgattcaggtgttgccactgaaaagtgaaaacccagta
accgttgcgaataaagttaagaaacaaattgatctgattcagcctcagttgccagaaggc
attgagatgaagatggtttataaccaagctgatttcattaaaaccgctatagatgaaggc
ttcatgactttagttgaagcgatagttttggtttcagcggttgtggttctgttccttggc
tcttttcgagttgcttcaattccgatcatcaccattcctgtgtgcgtaataggcgtattt
gccgtcatgcatttacttggatttagcatcaacgtactgacgattctggctatcattctc
gccattggtttggtggttgatgatgcgattgttgtggctgaaaactgctaccgtcatatc
gaagagggtgaaactccgttcaatgctgcaattaaagggtgtcgagagatcgtcttccca
gtgattgcgatgacgctaactctggcggttgtttacttaccaattggcttgatggctggc
ttaaccgccgatctgttcaggcagttcgcgttcacacttgctgcagcggtgatcatctct
ggatttgtggcgttaacactctcaccaatgatgagtgcttacttaatgaagccagtatca
actccggcgaagtggtatcaaaaagttgatgcgaaactgaatgtgttatcggatttatac
accaaagagctaggcaaatggtttgatcgtaaggctctgatgagtggtattgctttagtg
ctgatcgctttatcggccttagcggtttggaaaatgcctcaagtgttacttccaaccgaa
gataccggttttgttgaggtgacttctacgccaccaacaggtgttggtcgtcagtatcat
ctagataacaacgagcaactgaacagtgtgttcaaaggtgatagttcagtagaagcgaac
ctatcttacattgaaggtacaccgaccaatcacgttctattgaaaccatggggcgaacgt
gaccagtcagcggatgaattggtaaacgagtttatcgctaaggcacaaagttcagtctct
gcttacggcatgtctttcaaggttcgctcagcagataacttgaacatcgctaccaacatg
atccttgaactgaccacagttaaccgtgataccactgtgctgtctgaaaccgcgagcgaa
gtcgttaaagcgcttgaagattacgagggcgtgaccaacattaagaactcaatgttgcgt
gaccaattacgttacgacttgtcgattgatcgcaatgcgattgtattgtctggtgttgat
tacggtaacgtaaccaatgcgttatcgacattccttggttctgttaaagccgcagatttg
caagcggacgacggttatacatacccaattcaagttcaagtgaaccgaaatgaccttggt
gatttcaaggtgctcgataagctgtatgtggattcacagtcggggcaaaggcttccttta
tcccagtttgtatcaatcaaacaagtgacatcggaatctaacttcaagacgttcatgggt
aaagacagcgctgaaatcaccgcggacttgatgcccggatatacggcgagcgacgtgaag
gcatacattgatgacacggtaccaagcctgttgaaacctgcccagagctacgagttcaat
ggcatcgttaaagatttggttgattcaaccgcgggcgcacaagtgctgttcgtattggca
ttgatttttatcttcttgatcttggcggcgcagtttgaaagctttgtcgacccgatgatc
atcttgctgacggttccactgtgtattgtgggcgcaatattgacgctttcggtatttggt
caaagcctgaatatttactcgaagataggattgctgacactggttggtcttgtgaccaaa
cacggtattttgctggtggagtttgccaacgagaaacgcaaatctggcgcgagtgccaaa
gaagcggcgatcagcagtgcacgttcaaggctgcgtccaatcttgatgacctcactgacg
atgatcctcggttcattgccattggcactggcggatggcccgggttcattaggtcgaatc
aatattggtttggtattagtcggaggtttgactgccggaaccttcttctcattgttctta
gtgccagttgcttacgttggcatggcgaatctaaaacagatggacatactgactcggttg
agaacgaaacccgcataa
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