Vibrio crassostreae: IS519_22575
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Entry
IS519_22575 CDS
T08776
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vcra
Vibrio crassostreae
Pathway
vcra01501
beta-Lactam resistance
vcra01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS519_22575
01503 Cationic antimicrobial peptide (CAMP) resistance
IS519_22575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcra03036
]
IS519_22575
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcra02000
]
IS519_22575
01504 Antimicrobial resistance genes [BR:
vcra01504
]
IS519_22575
Chromosome and associated proteins [BR:
vcra03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IS519_22575
Transporters [BR:
vcra02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IS519_22575
Antimicrobial resistance genes [BR:
vcra01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IS519_22575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
OEP
LPAM_1
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
UPR31639
LinkDB
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Position
2:complement(1409660..1410799)
Genome browser
AA seq
379 aa
AA seq
DB search
MNQGCGHSMYRRICREHTMKKTITLLTASILLAGCGGNSQPTEQTAAPVPSTPVTVVLAE
EMAHSPIQYHVGRMEAVESAQLTPRTSGFLLNKLFDDGAFVEAGAVLFEIDPTSYQAAFD
AAKATLSEAQSALSLTQLNHERTTQMLKSGGISQSQLDLSIAELEMARSRVVSARANVRV
QQDNLDQTQVKAPYSGQLGKSNFSIGDMVGPNFGPLIDLIKMDPIDATFSIKESELSQYQ
LQGKQATSVLLERDGQLTDYQGNIAFVDNKVNAASGTVTISASFDNSEAGLLPNQFVRVG
LTSAEPLSGVQIPHKAIHQDQLTQYVLTIEEGNAVRRDVVVGDRIGQDVFVANGLDAGEP
VIVGGLQRIRPGAPVSVAE
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcaaggatgcggtcactcaatgtatcgacgtatttgtagagaacacacgatgaaa
aaaacaataacgttattaaccgcaagtatcttacttgcaggctgtggtggtaattcacaa
cctacggagcaaaccgctgctccagtgcctagtacacctgtaactgtggtgcttgcagag
gaaatggcacattcgccaatccaataccacgtcggaagaatggaggcggttgaatctgct
caactgacaccaagaaccagtggtttcttgttaaataaactctttgatgacggtgccttt
gtcgaagcgggcgctgtgctttttgaaattgacccaacgtcataccaagcggcatttgat
gcggcaaaagcaaccttatctgaagcgcaatcggcactgagcttgactcagctaaaccat
gaaagaaccactcagatgttgaaatcgggcggtatttcacagtcgcagcttgatttgagt
attgcggagctagagatggcgagatctcgagtggtgtccgcgcgagcaaacgtaagagtt
cagcaagacaacttagaccaaacccaagttaaagcaccgtactcaggtcagttagggaaa
agtaacttctctatcggtgacatggtaggccctaactttggcccattgattgacctgatc
aagatggatccgatcgatgcgaccttctcgattaaagaaagcgaactgagtcaatatcag
cttcaaggtaagcaagcgacatcagtattgcttgagcgtgatggtcaattgacggattac
caaggcaacatcgcttttgttgataacaaagtgaatgcagccagcggtacggtgacgatt
tctgcctcttttgataacagcgaagcgggtttgctgccaaatcaatttgttcgtgttggg
ctgacgagtgcagaaccattaagcggcgtgcaaattcctcataaggcgatccatcaagat
cagctcactcaatatgtacttactatcgaagaaggtaatgcggtacgtcgtgatgtcgtt
gtaggtgatcgaattggacaagatgttttcgtcgcaaatggcttggacgccggtgaacca
gtgattgttggcgggctgcaacgcattcgtcctggtgcccctgtttcagttgcggagtaa
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