Vespa crabro (European hornet): 124431255
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Entry
124431255 CDS
T09462
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03018
RNA degradation
vcrb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124431255
09123 Folding, sorting and degradation
03018 RNA degradation
124431255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124431255
03041 Spliceosome [BR:
vcrb03041
]
124431255
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124431255
mRNA degradation factors
5'-3' decay
Lsm complex
124431255
Spliceosome [BR:
vcrb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124431255
Complex C
U2 snRNP components
124431255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
vATP-synt_E
Motif
Other DBs
NCBI-GeneID:
124431255
NCBI-ProteinID:
XP_046834873
LinkDB
All DBs
Position
20:complement(1469505..1470453)
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AA seq
103 aa
AA seq
DB search
MADESEQVPAINVKEPLDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMVLGEAEETV
TTVEIDEETYEEVYRTTKRNISMLFIRGDGVILVSPPSMRAPM
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaatcggaacaggttccagcaataaatgtgaaagaaccgttggatttaata
agattaagtttggacgaacgaatttacgtgaaaatgagaaacgaaagagaattacgagga
cgtttacatgcctatgatcaacacttgaatatggtattaggtgaagcggaggaaactgtt
acaactgtagaaattgatgaagaaacatatgaagaagtttaccgtactacaaaaagaaat
atatctatgctatttatccgtggtgatggtgtcattttagtatctccgcctagcatgaga
gcacccatgtaa
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