Candidatus Vallotiella adelgis: GJV44_00682
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Entry
GJV44_00682 CDS
T07928
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vcv
Candidatus Vallotiella adelgis
Pathway
vcv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJV44_00682 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcv03400
]
GJV44_00682 (nth)
Enzymes [BR:
vcv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GJV44_00682 (nth)
DNA repair and recombination proteins [BR:
vcv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GJV44_00682 (nth)
Prokaryotic type
GJV44_00682 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
HHH_5
SdiA-regulated
Motif
Other DBs
NCBI-ProteinID:
UDG82410
LinkDB
All DBs
Position
879354..880028
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AA seq
224 aa
AA seq
DB search
MNPKNRRAIYETLQILTPYPTTELKYTTPFELLIAVMLSAQATDISVNKAMRQMFAVANT
PQAILALGEDGVAQHIKIVGLYRTKSKHIILTCKILLDKYYGEVPADREMLESLPGVGRK
TANVVLNIAFGHATIAVDTHIFRVANRTGIAPGKDVRAVEAMLEKLTPPKFRYNAHHWLL
LHGRYVCRARLPTCWNCAIESICEFTNKTRIPTESSNASSRQAS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaaaaatcgccgtgcgatttatgaaactttacaaatcctgaccccatatccg
acgacggagcttaagtacaccacaccatttgaattgctaattgcagtcatgctatcagca
caggcaacggacatctcggttaacaaagcaatgcgccagatgtttgcggttgctaataca
ccacaagctattcttgcgcttggcgaagacggtgttgcgcagcacattaaaatagtggga
ttgtatcgtaccaagtctaagcacatcatcttgacctgtaaaatactacttgacaaatac
tatggcgaagtgccagctgatcgcgaaatgcttgagagtctaccgggcgtaggccgaaag
acagcgaacgtcgttctgaatattgcattcggtcacgcgacgattgccgttgatacacac
atcttccgtgtagcaaatcgcaccggaatagcacctggcaaggacgtacgggccgtagaa
gcaatgctagaaaaactcacgccgcccaaattccgatataacgctcaccactggcttctc
ctacacggccgatatgtatgccgcgcccgcttacctacatgctggaattgtgccatcgaa
tcgatatgtgaattcacgaacaaaacccgtattcctactgaatcaagcaatgcttcttct
agacaagcttcgtag
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