Vibrio cholerae O49 1154-74: VAA049_2739
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Entry
VAA049_2739 CDS
T03828
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VAA049_2739 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcx03400
]
VAA049_2739 (nth)
Enzymes [BR:
vcx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VAA049_2739 (nth)
DNA repair and recombination proteins [BR:
vcx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VAA049_2739 (nth)
Prokaryotic type
VAA049_2739 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AKB03495
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All DBs
Position
3027846..3028487
Genome browser
AA seq
213 aa
AA seq
DB search
MNNAKRIEILERLRANNPKPETELNWNSPFELLIAVLLSAQATDVSVNKATYKLYAVANT
PQAMLDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAVGKNVDEVEHKLLKVVPNEFKLDVHHWLI
LHGRYTCVARKPRCGSCIIEDLCEFKDKVYPES
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgcgaaacggattgaaattttagaacggctgagggctaacaacccaaaaccc
gaaaccgaattaaactggaactccccctttgagttgctgattgctgtactgctctccgcg
caagcgaccgatgtcagcgtcaacaaagccacctataaactgtatgcagtggccaatacg
ccacaagccatgcttgatctaggtgttgatggcgtcaaagagtacataaaaaccattggt
ttatttaactctaaagccgaaaacgtcatcaaaacttgccgtattttgcttgaaaagcat
caaggtgaagtgccggaagatcgtgaagcattagaagcgctgccaggcgttgggcgtaaa
accgccaatgtggtgttgaatacagcctttggctggccgactattgcggtcgatacgcac
atctttcgcgtctccaatcgcaccaaatttgcggtcggcaaaaacgtcgacgaagtagag
cacaagctactcaaagtcgtacctaatgagtttaaactcgatgtgcaccactggctgatt
ctgcatggccgttacacctgtgtcgcgcgcaaaccacgttgtggcagttgcattatcgaa
gatctttgtgaattcaaagataaagtgtacccagaaagctaa
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