Vibrio cholerae O27 10432-62: VAB027_2016
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Entry
VAB027_2016 CDS
T03829
Symbol
acnD
Name
(GenBank) 2-methylisocitrate dehydratase, Fe/S-dependent
KO
K20455
2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:
4.2.1.117
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz00640
Propanoate metabolism
vcz01100
Metabolic pathways
vcz01120
Microbial metabolism in diverse environments
vcz01200
Carbon metabolism
Module
vcz_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VAB027_2016 (acnD)
Enzymes [BR:
vcz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.117 2-methylcitrate dehydratase (2-methyl-trans-aconitate-forming)
VAB027_2016 (acnD)
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
AKB06891
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Position
2159634..2162240
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AA seq
868 aa
AA seq
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MNSLYRKALSPNPTQSQVDFFDTRAAVEALKPGAYQTLPYTARILAENLVRRCPPEQLSE
SLLQIIERKRDLDFPWYPARVVCHDILGQTALVDLAGLRDAIADQGGDPAQVNPVVETQL
IVDHSLAVEYSGCDPDAFEKNRAVEDRRNEDRFHFIEWCKTAFKNVSVIPAGNGIMHQIN
LEKMSPVVQVKEGVAFPDSCVGTDSHTPHVDALGVLAIGVGGLEAETVMLGRPSMMRLPD
IVGVKLTGARQPGITATDIVLALTEFLRRERVVSAYLEFFGEGAKALTIGDRATISNMTP
EYGATAGMFYIDEQTIQYLKLTGREPEQVALVESYAKAAGLWADSLAHAEYERVLEFDLS
SVERNLAGPSNPHRRLPTKDLSARGIAIPAQQREAQQAEGLMPDGAVIIAAITSCTNTSN
PRNVVAAGLLAKKANQLGLKRQPWVKTSFAPGSKVAKLYLEEAGLLSELEQLGFGIVAYA
CTTCNGMSGALDPAIQQEIIERDLYATAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAI
AGTMRFDIERDALGHDAQGKPIYLNHLWPSDEEIDAVVGRAVKPEQFKQIYIQMFKLDET
QSASSPLYDWRPMSTYIRRPPYWEGALAAPRTLKAMRPLAILGDNITTDHLSPSNAILAS
SAAGEYLTKMGVPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVKENGQIKQGSLARIE
PEGKVTRMWEAIETYMNRKQPLIVIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIH
RTNLVGMGVLPLEFKPGVNRHSLALDGTELFDVVGEIRPGADLALVVTRKNGEKLDVAVT
CRLDTADEVHVYQAGGVLQRFAQDFLAQ
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtctgtatcgtaaagctttatcgccaaaccctacgcaatctcaggtcgatttt
tttgatacgcgcgctgcggtcgaggcgttaaaaccgggcgcataccaaactttgccttac
acggcgcgcattctggccgaaaatttggtgcgccgctgcccaccggaacaattgagcgaa
agtctgctgcaaattatcgagcgtaaacgcgatcttgatttcccttggtatcccgcgcgc
gtggtgtgccacgatattctcggccaaaccgcactggtcgatctagcgggcttgcgtgat
gcgatagccgatcaaggcggcgaccccgcgcaagtcaatcctgtcgtagagactcagttg
attgtcgatcattcgttggcggtggaatattctggctgcgatcctgatgcgtttgaaaaa
aatcgcgcagtagaagacagacgcaacgaagatcgcttccactttatcgagtggtgtaaa
accgcgtttaaaaacgtcagcgtgatccccgccggtaacggcataatgcatcagatcaat
ctggaaaaaatgtcgccagtggtgcaagtgaaagagggcgtggcattccctgattcttgc
gtaggaaccgatagccacacgccacacgtcgatgccctcggtgtgctcgcgattggtgtg
ggcggccttgaagcggaaactgtaatgctcggtcggccttccatgatgcgcttgccagat
attgtcggtgtgaaactgaccggagcgcgccaaccgggcattaccgcaaccgatattgtg
ttggccttaaccgaatttctgcgccgcgagcgcgtggtctcggcctatctggaatttttc
ggcgaaggggcgaaagcgctgaccattggcgatcgcgcgaccatctccaacatgacgccg
gaatacggcgcgaccgccggcatgttctacattgatgaacagaccattcaatacttaaaa
ctgactggccgcgagccagagcaagtcgctttggtcgaaagctacgccaaagccgcaggt
ttatgggctgatagtttagcgcacgcggaatacgaacgtgtgctggagtttgatctctcc
agcgttgagcgcaatttggcggggccttccaatccgcatcgccgtttgccgaccaaagat
ctgagcgcgcgcggcattgccatacctgctcagcaacgagaagcacaacaagcagagggc
ttgatgcctgatggcgcggtgatcatcgccgctatcacttcctgtaccaacaccagtaac
ccgcgtaacgtggttgcggcagggctactcgccaaaaaagctaatcagctcggccttaaa
cgtcaaccttgggtgaaaacctcatttgcgcccggctcgaaagtcgccaaattgtacttg
gaagaggctgggctgctctctgaacttgaacaacttggctttgggattgtggcgtatgcc
tgtaccacttgtaacggcatgagtggcgcgctcgacccagccattcaacaagaaattatt
gaacgcgatctctacgctacggcggtgctgtctggcaaccgcaactttgatggccgtatc
catccgtatgccaaacaagcgtttttggcttcgccgccactggtcgtggcttacgcgata
gcaggcacgatgcgctttgatattgagcgtgacgcgctgggtcacgatgcgcaaggcaag
ccaatttatctcaatcacttatggccaagtgatgaagagattgatgccgtcgtcggccgc
gcggtcaagccggagcagttcaagcagatctatatccagatgtttaaactcgatgagaca
caaagcgcgagctcaccgctgtatgactggcggccgatgagcacgtatattcgccgtcca
ccgtattgggaaggggcgctcgcggcgccgcgaaccttgaaagcgatgcgaccactggcg
attttgggtgacaacatcaccacggatcatttatcaccctccaatgccattttggcgagc
agcgcagctggagaatacctgaccaaaatgggcgtgccagaggaagattttaactcttac
gccacccaccgtggtgatcacctcaccgcacaacgtgccacgtttgccaacccgaaactg
tttaacgaaatggtcaaagaaaacgggcagatcaaacaaggttctctcgcgcgcattgag
ccggaaggcaaagtgacgcgcatgtgggaagcgattgaaacttacatgaaccgcaaacaa
ccgctgattgtgattgcgggagcggattacggccaaggctcatcacgtgattgggcggcc
aaaggtgtgcgtttagccggcgttgaggcgatcgtggccgaaggctttgagcgcattcac
cgcaccaacttggttgggatgggcgtactgccgctagagtttaagccgggcgtcaatcgc
cactcgctagcgctcgatggcactgagctgtttgatgtggtgggtgagatcaggcccggt
gcagatttagccctagttgtgaccagaaaaaacggcgagaagctggatgtggcggtgacg
tgtcgtttggacacggccgatgaagtgcacgtgtatcaagcgggtggcgtgttgcaacgc
ttcgcgcaagactttttggcgcagtag
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