Verticillium dahliae: VDAG_01266
Help
Entry
VDAG_01266 CDS
T03450
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vda03400
]
VDAG_01266
DNA repair and recombination proteins [BR:
vda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
VDAG_01266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
zf-C3HC4
AAA_34
zf-RING_2
zf-C3HC4_3
IBR_1
RING_XB3-XBAT31
zf-RING_UBOX
ERCC3_RAD25_C
Zn_Tnp_IS91
Motif
Other DBs
NCBI-GeneID:
20702729
NCBI-ProteinID:
XP_009648447
UniProt:
G2WTZ3
LinkDB
All DBs
Position
1
AA seq
1004 aa
AA seq
DB search
MAPRKTRTSAAHSLASRIETPESSRSRRMTRSTSTQNLSSAVSPPPVDAIEPLSVAVRGS
KSTTSASTSATFTSASEASTPATSHEVTPAPPAADEKSASSRPMMSRLEVQIPVMERAPS
ERATRNTRFSLARASKRSSNTYEVLDSDEDELSFDTSPDEIIARRLQKEEYEKIDMPTLV
STSRPVRGLRASLDRTPVLKGKRGRPSKSPLSASIERPTKKQKFIDDSEDDALSDDANGQ
ASSSDLSEALSIKTDSDDFEAPEETGEDDSSDDMVEVARPRFVAQPKKRRPAQPNAPPGF
RSAATLPILPSSEPDDDDFDPDRSDEELPELADASARINLDDSHDFVLGRRARRERDRLE
RHHPELDTMWTDLEARPAMSGAEAVQPTNITRQLKPFQLKGVAWMKEMETTDWKGGLLGD
EMGLGKTLQSVSLIMSDHGSIKKPSLVLVPPVALMQWTNEIASYTDGTLKTFVFHGTNTK
VKNVTAKELKKYDVIMMSYNSLESMFRKQEKGFNQRKKGEVHKQKSIIHQIDFHRIILDE
AHYIKGRDTGTARACIALKGDYRWCLTGTPLQNRIGELFSLVRFLNITPFASYLCKQCKC
SQLEWNMDEHKMCNSCGHSAIQHVSVFNQEILNPIIKYGAMGPGAIAFKKLRLITSKFML
RRLKKDHMSAMDLPVKEININREFFSEVENDFARSIMTNTQRQFDTYVARGVMLNQYANI
FGLLMQMRQIADHPDLILKKNAEGGQNIMVCCICDEPAEDAIRSKCRHDFCRGCARDYMM
SSKSNMDELSCPMCHIPLAIDLEQPEIEQDQAMVKKSSIINRIKMEEWTSSSKIETLVYE
LHKLRSDKATHKSIVFSNFTSMLQLIEWRLRRAGVTTVMLDGSMTPAQRQASIDHFMKNP
EVECFLVSMKAGGVALNLTEASHVFIVDPWWNPAAEWQSADRCHRIGQGRPCTITRLCIE
DSVESRIVQLQEKKTNMIHSTVNGDDKAMKSLSPEDMQFLFRGS
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgcaaaacccgcacctcagccgcgcactctcttgcgtccaggatcgagacc
cctgagagtagtcgctctcgtcgaatgaccaggtctacctcgacccaaaacctgagctct
gcagtttctccaccgcctgtagacgctatcgaacccttgagcgttgccgtaagaggcagc
aaatcgacaacgtcggcctcgacctcggctactttcacctcagcaagcgaggcttctact
ccggctacgagccacgaggtcacgccagcgccaccggctgctgacgagaagtcggcatct
tctcgacccatgatgagtcgtctggaggtgcagattccagtaatggaaagagctcccagt
gagagggccactagaaacacccggttttcactcgctcgcgcctcgaagcgcagcagcaac
acgtatgaagttctcgacagtgacgaggatgagttgtcttttgacacttctcctgacgag
atcattgctcggcgcctacaaaaagaagagtatgaaaagatcgacatgccaactcttgtg
tctaccagtcgtccagtccgtggtctgcgagcttctttggatagaacccctgtactcaag
ggcaaacgcggcagaccatcaaagtctccactctcggcaagcatcgaacggcctacgaag
aagcaaaagtttattgatgattccgaagacgatgccctctctgatgacgccaatggtcaa
gcttcgtcttcagaccttagcgaggccttgagcatcaaaacagattcggatgattttgaa
gcccccgaggagacgggcgaggacgacagcagcgatgatatggttgaagttgcgcggccg
cgtttcgtggcgcagcctaagaaaaggcgcccagctcagcccaatgctcccccaggcttc
agatcggctgccacgttgccaatccttccttcctcggagcctgatgatgatgatttcgac
ccagatcggtcggacgaggagctccccgaacttgctgatgctagcgctcggataaatctc
gacgactcgcatgactttgtgctcggccgtcgtgcccgccgtgagcgggaccgacttgag
agacatcacccagaactcgatacaatgtggacagacttggaagcacggcctgccatgtcc
ggtgctgaggcggttcagcccaccaacattacacgacagctcaagccttttcagctgaag
ggtgttgcttggatgaaagagatggagacgactgattggaagggtggccttctgggtgat
gagatgggcttgggcaagaccctacagagcgtctccctcatcatgtccgaccacggctcg
atcaagaagccttccctcgttttggtcccgcctgttgccctgatgcaatggaccaacgag
attgcctcgtacacagacggaaccctgaagacgttcgttttccatggcaccaatacaaag
gtcaagaacgttacggccaaggagctcaaaaagtacgatgtcatcatgatgtcgtacaac
agtttggagtccatgtttcgcaagcaggaaaaggggttcaaccagcgcaagaagggcgag
gtccacaagcagaagagcataatccaccaaatcgactttcaccgaatcattctcgacgag
gcacactacatcaagggccgcgacacgggcactgccagggcatgcatcgccctgaaaggc
gattacagatggtgtctgactggtacgcctctccagaaccgaatcggagagctgttctca
cttgtgcgctttctcaacattacaccattcgcctcgtatctttgcaagcagtgcaagtgc
agccaactcgagtggaacatggacgagcacaagatgtgcaacagttgcggacattctgcc
attcagcacgtgtccgtgttcaaccaggagattctgaaccccatcatcaaatacggtgcc
atgggtcccggtgccatcgccttcaagaagctgcggctgataactagcaagttcatgctt
cgccgcttgaagaaggaccatatgagtgccatggacctgcccgtcaaagagatcaatatc
aaccgggaattcttcagcgaggtggagaatgactttgcgcgcagcatcatgaccaacacg
caacgccagttcgacacgtatgtggcccgtggcgtcatgctgaaccagtatgccaacatt
ttcggtctactcatgcaaatgcgccagattgccgatcatcctgacttgatcctcaagaag
aatgccgagggcggtcagaacatcatggtctgctgcatttgcgacgaacctgccgaggat
gcgattcggtccaaatgtcggcacgacttctgccgtggctgcgccagggattacatgatg
tcgtccaagagcaacatggatgagctgtcgtgtcccatgtgccacataccgctggcgatc
gacctggagcagcccgagattgagcaggaccaggccatggtaaagaagtcgtccatcatc
aaccgtatcaagatggaggagtggacttcgtcaagcaagatcgagacgctcgtatacgag
ctgcacaagctccggtctgacaaggccacgcacaagtcgattgtgttttccaactttacg
tcgatgcttcagctcattgagtggcgtctccgccgcgccggcgtcaccactgtcatgctc
gatggttcgatgacgcctgcgcaacgacaggcatctatcgaccatttcatgaagaaccca
gaagtcgagtgcttcctggtttccatgaaggcgggaggtgtggctctcaacctgactgag
gcgtctcacgtctttatcgtcgacccctggtggaaccctgcggccgagtggcagtctgcg
gatcgctgccatcgtatcggacagggccgtccctgtaccataacccgtctttgcatcgag
gactcggtagagagccgtattgttcagcttcaagagaagaagacgaacatgatccactcg
accgtcaatggggatgacaaggcgatgaagtcgctcagccctgaggacatgcagttcctt
ttccgtggcagttag
DBGET
integrated database retrieval system
