KEGG   Verticillium dahliae: VDAG_10349
Entry
VDAG_10349        CDS       T03450                                 
Name
(RefSeq) SMB protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
vda  Verticillium dahliae
Pathway
vda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VDAG_10349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vda03019]
    VDAG_10349
   03041 Spliceosome [BR:vda03041]
    VDAG_10349
   03032 DNA replication proteins [BR:vda03032]
    VDAG_10349
Messenger RNA biogenesis [BR:vda03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     VDAG_10349
Spliceosome [BR:vda03041]
 Complex A
  U1 snRNP components
   Sm proteins
    VDAG_10349
  U2 snRNP components
    VDAG_10349
 Complex B
  U1 snRNP components
    VDAG_10349
  U4/U6.U5 tri-snRNP components
    VDAG_10349
 Complex C
  U2 snRNP components
    VDAG_10349
DNA replication proteins [BR:vda03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     VDAG_10349
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 20711812
NCBI-ProteinID: XP_009658113
UniProt: G2XJE8
LinkDB
Position
Unknown
AA seq 220 aa
MANKQGKMADLTRSIFRPATYINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRV
KRKQNKPSAPGASGSGQTVESEEKRTLGLTIVRGAQIVSLSVESEPPADPSARLGRSATG
GIASTLSAGPGVARPAGRGAAVPPSLAGPAAGVGGGAPPPSFPGFPGGAPPFAGRGAPPP
GFPGGFPPGFPPQGGGFPPQGFPPGPPGGGPPGFNPPPRR
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcgaacaaacaggggaagatggctgacttgacgcgatctatctttaggccggctacg
tacatcaactaccggatgagagtcactctgaacgacggtcgccagatgaccggtcaaatg
cttgcgtttgacaagcacatgaacctcgtcctcgccgacacggaagagttccgacgcgtc
aagcgcaagcagaacaagccctccgcgcctggcgcgagcggctctggccagactgtcgag
tcggaggagaagaggaccttgggccttacgatcgtccgcggcgctcagatcgtctcgctg
tcagtcgagtcggagcctcctgcggaccctagcgctcgcctgggcaggagcgcaaccggc
ggtatcgcatcgactctcagtgctggccctggtgttgcccgccctgctggtcgcggggct
gctgtgccgccgtcattggcaggacctgctgctggtgttggtggtggcgcgcctccccct
agtttccccggattccctggcggtgctcccccttttgccgggcgtggagcccctcccccg
ggtttccctggcggattcccccccggcttccctcctcagggtggcggattccctccccaa
ggcttccctcccggtcctcctggcggcggtcctcctggcttcaacccaccgcctcggagg
taa

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