Vibrio diabolicus: AL552_10620
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Entry
AL552_10620 CDS
T05332
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb00540
Lipopolysaccharide biosynthesis
vdb01100
Metabolic pathways
Module
vdb_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AL552_10620 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vdb01005
]
AL552_10620 (lpxC)
Enzymes [BR:
vdb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
AL552_10620 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
vdb01005
]
Lipid A
AL552_10620 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AVF94231
UniProt:
A0AAX1XHR2
LinkDB
All DBs
Position
1:345111..346028
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AA seq
305 aa
AA seq
DB search
MIRQRTLKEIVKTTGVGLHSGRKVTLTLRPAAANTGIIYRRTDVNPPVDFPADPASVRDT
MLCTALVNDEGVRISTVEHLNAALAGMGIDNIIVEVDAPEIPIMDGSASPFVYLLQQAGI
ETQNAPKRFIRIKKPVRFEDGDKWAEFVPFNGFRMDFEIEFNHPAIESDEQRLLFDFSSK
GFVREISRARTFGFMRDIEYLQSQNLVLGGSFDNAIVLDDYRILNEEGLRFENEFVTHKV
LDAIGDLYMCGHPIIGEFRAFKSGHGLNNQLLRAVLADQEAWEWTTFEEEVGSPVAFAEP
NMVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacaacgtactctgaaagaaatagtgaaaacaactggtgtgggcctccactct
ggtcgtaaagtcacgcttactctgcgcccggctgctgcaaatacaggtatcatttatcgt
cgtacagatgtaaacccacctgtagattttccagctgatccagcttctgttcgtgacacc
atgctatgtactgcattggtaaacgacgaaggtgtgcgtatttcaactgtagaacacttg
aatgcggcacttgctggtatgggcatcgacaacattattgtcgaagtagacgcacctgaa
attccaattatggatggtagtgctagcccatttgtatacttgttacaacaagcaggtatc
gaaacgcaaaatgcgccaaaacgtttcatccgtattaaaaagccagttcgttttgaagat
ggcgataaatgggcagagtttgtaccatttaacggcttccgcatggacttcgaaattgaa
tttaatcaccctgcaattgagtcagacgagcagcgcttgctgtttgatttctcctcaaaa
ggcttcgttcgtgaaatttctcgtgcacgtacgtttggctttatgcgtgatatcgaatat
ctacagtctcaaaacctagttttgggtggtagtttcgacaatgctatcgtattggatgat
taccgtattcttaacgaagaaggtctacgctttgaaaatgagtttgtgactcacaaagtg
ttggatgcgattggtgatctttacatgtgtggtcacccaatcatcggtgaatttcgcgcc
tttaaatcgggtcacggtttgaacaaccaacttctgcgagctgttcttgctgatcaggaa
gcgtgggagtggactacattcgaagaagaagtgggctcaccagtagcattcgctgaacca
aatatggtgcttgcgtaa
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