Verrucomicrobium sp. GAS474: SAMN05444156_1598
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Entry
SAMN05444156_1598 CDS
T09813
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
veg
Verrucomicrobium sp. GAS474
Pathway
veg00020
Citrate cycle (TCA cycle)
veg00785
Lipoic acid metabolism
veg01100
Metabolic pathways
veg01110
Biosynthesis of secondary metabolites
veg01120
Microbial metabolism in diverse environments
veg01200
Carbon metabolism
veg01210
2-Oxocarboxylic acid metabolism
Module
veg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
veg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SAMN05444156_1598
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SAMN05444156_1598
Enzymes [BR:
veg01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SAMN05444156_1598
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
ARS2
Motif
Other DBs
NCBI-ProteinID:
SDU03840
UniProt:
A0A1H2F8W6
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All DBs
Position
I:1898704..1901550
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AA seq
948 aa
AA seq
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MSETSSSAALPPVLERSLNKNGTNGAHARGHIGNPEHTALLEEYYEQWKIDPELVDPMWR
SFFEGFELGVQTLPSKSAKGAAPAASSTGKPVVPEGDTASRLKQARVYNLFFAYRILGHR
IANLDPLGFNKTTFPDLDIENFRFTEADLDTVFDSGSLAGGGERTLREILALLKETYCGN
VGVEYMHMQIFPERRWLRDRLETTHCKPSYGNAKKKRILNNLLRAEGFESFLHTRFVGQK
RFSLEGGETLIPMLDAIIEASPQHGVSQVVMGMAHRGRLSVLCNILGKDYKFLLDAFADN
YVPQQVQGDGDVKYHLGFDSVQTTSSGEQVGISLAPNPSHLETVDPVVQGKARAYQRLLN
DTTERRKVLPILIHGDAAFAGQGVVYETLNMSQLEGYRTGGTLHIVINNQIGFTTLPQDS
RSTVYCTSMAKGLGIPVFHVNGDDPLSAVFVTELALEYRQRFQRDVVIDLVCYRRHGHNE
GDEPNFTQPTLYGEIQRHDLISAIYLKELIKSGDITEAEAQDYIKKFEDRLSAALTESKL
TVKDIVPAIRKPLSTPELLTNTVETSVPEATITRVGTALVTIPATHKVNAKIQKVLDGRR
AMIEGKQPLDWAMAEALAFGTLVDQNHPVRLSGQDSRRGTFSHRHSTVYDVETRERYIPL
KHISENQATFCVYNSPLSEYAVLGFDYGYSLDYPKVLVLWEAQFGDFANGAQIMIDQYLV
SAEAKWGITSNIVMLLPHGYDGQGPEHSSARLERFLQACAEDNIIVANITTPANFFHLLR
RQALNPIRKPLVVMTPKGLLRDKRCVSALADLSAGRFEEILPDLARPKAPKRLVLSTGKI
YYDLDDQRKAANDTNTTLVRIEQIYPLHEQKLLSIVGDPKQYDQIVWCQEESQNMGAWHF
IEPRLRKLFGREIAYAGRDASSSPAVGALSIHKLEQKDVVHQAYSVTA
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagacctcctcctccgcggcgctcccccctgtcctcgagcgctccctgaataag
aatggcaccaacggtgcccacgcccggggccatatcggcaatcccgagcacaccgccctc
ctcgaagaatattacgagcagtggaagatcgatcccgaattggtcgatcccatgtggcgc
tccttcttcgagggcttcgagctcggcgtccagacccttccctccaagagcgccaagggt
gccgcccccgccgcctcctccaccggcaagcccgtcgtccccgagggcgacaccgcctcc
cgcctgaagcaggcccgcgtctacaacctcttcttcgcctaccgcatcctcggtcaccgc
atcgcgaacctcgatccgctcggcttcaacaagacgaccttccccgacctcgacatcgag
aacttccgcttcaccgaggccgacctcgacaccgtcttcgactccggctccctcgcgggc
ggcggcgagcggaccctccgcgagatcctcgccctcctgaaggagacctattgcggcaac
gtcggcgtcgagtacatgcacatgcagatcttccccgagcgccgctggctccgggaccgc
ctcgagacgacccattgcaagccgagctacggcaacgccaagaagaagcgcatcctcaac
aacctcctccgcgccgagggcttcgagtcgttcctccacacccgcttcgtcggccagaaa
cgcttctccctcgagggcggcgagaccctcatcccgatgctcgacgcgatcatcgaggcc
tccccccagcacggcgtctcccaggtcgtcatgggcatggcccaccgcggccgcctcagc
gtcctctgcaacatcctcggcaaggactacaagttcctcctcgacgccttcgccgacaac
tacgtcccccagcaggtccagggcgacggcgacgtgaagtaccacctcggcttcgactcg
gtccagaccacctcctcgggcgagcaggtcggcatctccctcgcgccgaacccgagccac
ctcgagaccgtcgaccccgtcgtccagggcaaggcccgcgcctaccagcgcttgctgaac
gacaccaccgagcgccgcaaggtcctcccgatcctcatccacggcgacgccgccttcgca
ggccagggcgtcgtctacgagacgctgaacatgtcccagctggaaggctaccgcaccggc
ggcaccctccacatcgtcatcaacaaccagatcggcttcaccaccctcccgcaggactcc
cgttccacggtgtactgcacctcgatggcgaagggcctcggcatccccgtcttccacgtg
aacggcgacgacccgctctccgccgtcttcgtcaccgagctcgccctcgaataccgccag
cgtttccagcgcgacgtcgtcatcgacctcgtctgctaccgccgccacggccacaacgag
ggcgacgagccgaacttcacccagccgaccctctacggggaaatccagcgccacgacctc
atcagcgccatctacctgaaggagctgatcaagagcggcgacatcaccgaggccgaggcc
caggactacatcaagaagttcgaggaccggctctccgccgccctcaccgagtcgaagctg
accgtgaaggacatcgtccccgcgatccgcaagcccctcagcaccccggagctcctcacg
aacaccgtcgagacctcggtccccgaggcgacgatcacccgcgtcggcaccgccctcgtc
accatcccggcgacccacaaggtcaacgcgaagatccagaaggtcctcgacggccgccgc
gccatgatcgaggggaagcagcccctcgactgggcgatggcggaggccctcgccttcggc
accctcgtcgaccagaaccaccccgtccgcctctccggccaggacagccgccgcggcacg
ttcagccaccgccactcgaccgtctacgacgtcgagacccgcgaacgctacatcccgctg
aagcacatctccgagaaccaggcgacgttctgcgtctacaacagcccgctctcggaatac
gccgtcctcggcttcgactacggctacagcctcgactacccgaaggtcctcgtcctctgg
gaagcgcagttcggcgacttcgccaacggcgcccagatcatgatcgaccagtatctggtc
agcgccgaggcgaagtggggcatcacgtcgaacatcgtcatgctcctcccccacggctac
gacggccaggggccggaacactccagcgcccgcctcgaacgcttcctccaggcctgcgcc
gaggacaacatcatcgtggcgaacatcaccaccccggccaacttcttccacctcctccgg
cggcaggcgttgaacccgatccggaagcccctcgtcgtcatgaccccgaagggcctcctg
cgcgacaagcggtgcgtctcggccctggccgacctcagcgcgggccgcttcgaggagatc
ctccccgacctcgcccgtccgaaggccccgaaacgcctcgtcctctcgaccgggaagatc
tactacgacctcgacgaccagcggaaggccgccaacgacacgaacaccaccctcgtccgc
atcgagcagatctacccgctccacgagcagaagctcctctcgatcgtcggcgacccgaag
caatacgaccagatcgtctggtgccaggaagagtcgcagaacatgggcgcgtggcacttc
atcgagccccgcctccgcaagctcttcggccgcgagatcgcctacgccgggcgcgacgcc
tcctccagccccgccgtcggggccctctcgatccacaagctcgagcagaaggacgtcgtc
caccaggcttacagcgtgaccgcctaa
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