Verrucosispora sp. TAA-831: ACQVFL_28210
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Entry
ACQVFL_28210 CDS
T11182
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vet Verrucosispora sp. TAA-831
Pathway
vet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACQVFL_28210 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vet03400
]
ACQVFL_28210 (nth)
Enzymes [BR:
vet01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACQVFL_28210 (nth)
DNA repair and recombination proteins [BR:
vet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACQVFL_28210 (nth)
Prokaryotic type
ACQVFL_28210 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XUR90184
LinkDB
All DBs
Position
complement(6325276..6326055)
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AA seq
259 aa
AA seq
DB search
MTRSATETDLGRTRRARRIGRVLTETHPDAHCELNHGNALELAVATILSAQCTDKKVNEV
TPKLFARYPGAADYAGANRDEMEEMIRPTGFYRNKTTSLIHLGQALVDRYDGRVPGRLAD
LVTLPGIGRKTANVILGNAFDVPGITVDTHFQRLVQRWRLTTETDPVKIEHAIGAMYPKR
DWTMLSHRIIFHGRRVCHARKPACGACTLAKLCPSYGTGPTEAAAAAKLLKGPRARDLAV
AAGVDPELVPVQAVRAEAP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagaagcgccaccgagaccgacctgggtcgtacgcgtcgggcgcggcggatcggc
cgcgtgctgaccgagacgcatcccgacgcccactgtgagctgaaccacggcaacgcgctg
gagttggccgtcgccaccatcctctcggcccagtgcaccgacaagaaggtcaacgaggtc
acgccgaagctcttcgcccgctacccgggcgccgccgactacgccggggcgaaccgggac
gagatggaggagatgatccggccgaccggcttctaccgcaacaagaccacctcgttgatc
cacctcggccaggccctcgtcgaccggtacgacggccgggtgccgggtcggctggccgac
ctggtgaccctgcccgggatcggccgcaagaccgccaacgtcatcctcggcaacgccttc
gacgtgcccggcatcaccgtcgacacgcacttccagcggctggtccagcggtggcgactg
accaccgagaccgatccggtcaagatcgagcacgcgatcggggcgatgtatccgaagcgc
gactggaccatgctgtcgcaccggatcatcttccacggccgacgggtctgccacgcccgc
aagcccgcctgcggcgcgtgcacgctggcgaagctctgcccgtcgtacggcaccggcccg
accgaggcagccgccgccgcgaagctgctcaagggcccccgggcccgtgacctggccgtc
gccgccggagtcgaccccgagttggtgccggtgcaggcggtccgggcggaggcgccgtga
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