KEGG   Vitreoscilla filiformis: VITFI_CDS1928
Entry
VITFI_CDS1928     CDS       T04960                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase Endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
vff  Vitreoscilla filiformis
Pathway
vff03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vff00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VITFI_CDS1928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vff03400]
    VITFI_CDS1928
Enzymes [BR:vff01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     VITFI_CDS1928
DNA repair and recombination proteins [BR:vff03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VITFI_CDS1928
 Prokaryotic type
     VITFI_CDS1928
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH EndIII_4Fe-2S
Other DBs
NCBI-ProteinID: ASM77706
UniProt: A0A221KFB5
LinkDB
Position
complement(2008309..2008962)
AA seq 217 aa
MSPAEVEAFFATLRAANPHPQTELNFSSVFELLAAVLLSAQATDVSVNKATRTLFAIAPT
PQRMLALGIEGVEVHIRTIGLYRTKAKHLLETCRLLIERHGGNVPRSRDALEALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRLGNRTGLAPGKTPLDVERQLLRRVPPAYRVDAHHWLI
LHGRYVCQARKPRCGECRVTSVCDHAKALASGHNLAP
NT seq 654 nt   +upstreamnt  +downstreamnt
atgagcccggctgaagtcgaagcgtttttcgccacgctgcgcgctgccaatccgcatccc
caaaccgagctgaacttcagcagcgtgttcgagttgctggctgcggtgctgctgtccgcc
caggcgacggatgtgagtgtgaacaaagccacgcgcacattgtttgccatcgcccccacg
ccgcagcgcatgttggctttgggcattgagggcgtggaagtacacattcggaccatcggt
ctgtaccgcaccaaggccaaacatttgctggaaacgtgtcgcctgttgatcgaacgacac
ggcggtaacgtgccccgcagccgcgacgccctggaagccttgccaggcgtcgggcgtaaa
accgccaacgtggtgctcaacgtggcatttggcgaaccgacgatggcggtggacacccac
attttccgcctcggcaaccgcaccggcctggcgcccggcaaaacgccgctcgatgtggag
cggcaactcctgcgccgtgtgccccccgcctaccgggtggatgcccaccattggctcatc
ctgcatggccgctatgtgtgccaagcacgcaagccgcgctgcggtgaatgccgggtgacc
tctgtttgtgatcacgccaaggccctggcctcagggcacaatctcgccccgtga

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