Aliivibrio fischeri ES114: VF_2165
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Entry
VF_2165 CDS
T00236
Symbol
dksA
Name
(GenBank) DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein
KO
K06204
RNA polymerase-binding transcription factor
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
VF_2165 (dksA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vfi03000
]
VF_2165 (dksA)
03021 Transcription machinery [BR:
vfi03021
]
VF_2165 (dksA)
03009 Ribosome biogenesis [BR:
vfi03009
]
VF_2165 (dksA)
Transcription factors [BR:
vfi03000
]
Prokaryotic type
Other transcription factors
Others
VF_2165 (dksA)
Transcription machinery [BR:
vfi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
VF_2165 (dksA)
Ribosome biogenesis [BR:
vfi03009
]
Prokaryotic type
rRNA transcription factors
VF_2165 (dksA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
TraA-like
Motif
Other DBs
NCBI-ProteinID:
AAW86660
UniProt:
Q5E2T6
LinkDB
All DBs
Position
I:2435161..2435610
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AA seq
149 aa
AA seq
DB search
MPESNTKRTLGILAIAGVEPYQEKAGEEYMGPAQVEHFTKILEAWRNQLREEVARTVNHM
KDEAANFPDPVDRAAQEEEFSLELRNRDRERRLIKKIEKTLTKIEEEEFGFCDSCGIEIG
IRRLEARPTADLCIDCKTLAEIKEKQMAG
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgccagagagcaatacaaaaagaacgctaggaattctagctatcgctggtgttgaacct
tatcaggaaaaagccggtgaggaatacatgggcccagcccaagttgaacactttacaaag
attctagaagcttggcgtaaccaacttagggaagaagttgcacgcactgtgaaccacatg
aaagatgaagcagcgaactttccagatccagttgatcgcgcagctcaagaagaagaattt
agtttagaactgcgtaatcgtgaccgtgagcgccgtttaattaagaaaattgagaaaaca
ctaacaaaaatcgaagaagaagaattcggcttctgtgattcttgtggtattgaaataggt
attcgtcgattagaagcacgtccaactgctgatctttgtattgactgtaaaactcttgca
gaaatcaaagaaaagcaaatggcaggttaa
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