Aliivibrio fischeri ES114: VF_A0495
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Entry
VF_A0495 CDS
T00236
Symbol
ygcF
Name
(GenBank) conserved protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00790
Folate biosynthesis
vfi01100
Metabolic pathways
Module
vfi_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
VF_A0495 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfi03016
]
VF_A0495 (ygcF)
Enzymes [BR:
vfi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
VF_A0495 (ygcF)
Transfer RNA biogenesis [BR:
vfi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
VF_A0495 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
PepSY_2
Motif
Other DBs
NCBI-ProteinID:
AAW87565
UniProt:
Q5E081
LinkDB
All DBs
Position
II:complement(570044..570724)
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AA seq
226 aa
AA seq
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MSAPLFKINELFETIQGEGTFTGVPSIFLRLQGCPVGCSWCDTKQTWDVELSDKTDLQTI
LAKTEDTPSWTELSSTQIIEMLENQGYTAKHMVITGGEPCMYDLTSLTQELEQHGYRCQI
ETSGTYPILASDDTWVTVSPKINMKGKLPVLPVALSRANEIKHPVGTTKDIEQLDALLEG
VELLEDVTIALQPISQKPRATELCIETCIKRNWRLSIQTHKYLAIA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaccattatttaaaattaacgagttattcgagaccattcaaggcgaaggaaca
tttaccggtgttccatctatatttttacgcttacaaggttgccctgttggttgttcttgg
tgtgatacaaagcaaacttgggatgttgaattaagtgataaaacagatttacagaccatt
ttagccaaaacggaagatacccctagttggacggaactgtcgagcactcaaataattgaa
atgttggaaaatcaaggttataccgcaaagcacatggtgattactggtggtgaaccatgt
atgtatgatctgacttcattgactcaagaactagagcaacacggttatcgctgccagata
gaaaccagtggcacttaccctattcttgcttcagacgacacttgggtgacagtgtcacca
aaaatcaacatgaaaggcaaattaccagttctgccagtcgccctatctcgtgcaaatgag
attaaacatccagttggtacaacaaaagatattgaacaacttgatgcattattagaaggt
gttgagttactcgaagatgtcactatcgctcttcagccaattagccaaaaaccaagagct
accgaactttgtattgaaacgtgtatcaaaagaaattggcgactttctattcaaacgcac
aaatatttagcgattgcgtga
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