Aliivibrio fischeri MJ11: VFMJ11_0968
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Entry
VFMJ11_0968 CDS
T00754
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VFMJ11_0968 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfm03400
]
VFMJ11_0968 (nth)
Enzymes [BR:
vfm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VFMJ11_0968 (nth)
DNA repair and recombination proteins [BR:
vfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VFMJ11_0968 (nth)
Prokaryotic type
VFMJ11_0968 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
P_gingi_FimA
Motif
Other DBs
NCBI-ProteinID:
ACH67204
UniProt:
B5FCM9
LinkDB
All DBs
Position
I:complement(1015721..1016356)
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AA seq
211 aa
AA seq
DB search
MNNVKRLEILERLRSENPNPQTELEWSTPFELLIAVLLSAQATDVSVNKATRKLYPVANT
PQSILDLGVDGLKTYIKTIGLFNTKAENVIKTCRMLIDLHGGEIPEDQEALEALPGVGHK
TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVNDVEKKLLKVVPKEFKLDVHHWLI
LHGRYTCIARKPRCGSCMIEDLCEFKEKTED
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgtaaaacgtttagaaattttagagcgcttacgttcagaaaatcccaatcct
caaaccgaacttgagtggtcaacgccatttgaattattaattgcagtactactttccgca
caagcaaccgatgttagtgttaacaaagcaacaagaaagttatatccagtagcaaatacc
ccacaaagcattttagatctaggggtagatggactaaaaacatatataaaaaccatcggt
ttatttaatacgaaagcagaaaatgtcattaagacctgtcgtatgctcattgatttacat
ggtggagagatccctgaagatcaagaagcgttagaagccctcccaggtgtcggccataaa
acagcaaatgtcgtattaaacacagcttttggatggcctacgattgctgttgatacccat
atttatcgtgtatctaatcgtactaaattcgccatgggtaaaacggttaatgatgttgaa
aagaaactactaaaagtggttccaaaagaattcaaattggatgttcaccattggttaatc
ttacatggccgttatacctgtatcgctcgaaaacctcgttgcggtagttgtatgattgaa
gatttatgtgaattcaaagaaaaaactgaagattaa
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