Aliivibrio fischeri MJ11: VFMJ11_2318
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Entry
VFMJ11_2318 CDS
T00754
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm00300
Lysine biosynthesis
vfm00550
Peptidoglycan biosynthesis
vfm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VFMJ11_2318
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VFMJ11_2318
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfm01011
]
VFMJ11_2318
Enzymes [BR:
vfm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
VFMJ11_2318
Peptidoglycan biosynthesis and degradation proteins [BR:
vfm01011
]
Precursor biosynthesis
Amino acid ligase
VFMJ11_2318
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACH65754
UniProt:
B5FB40
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All DBs
Position
I:complement(2489063..2490544)
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AA seq
493 aa
AA seq
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MMQLSELLLSWCELNQSVAISSMTLDSRQVSPGCLFVAIKGHAVDGRQFISSAIEQGAVA
VIADADEDNIAGTVKVINNAIVVYIDSLYTQLSAIAGAFYQADKRCMQLVGITGTNGKTT
ISQIIAQWTTLLDQPAAVMGTTGNGLLSDLKPALNTTGSPIEIQQTLTELENIGAKLTAL
EVSSHGLVQGRVNALSFDAAVFTNLSRDHLDYHGDMENYAEAKKLLFTSHRPKHSIINAD
DQVGCQWLKEMPHAVAVSLNEENISFHSGKKVFATSVVYSTEGIQLSVSSDWGNVAFSVP
LIGAFNASNILVAFATLLSLGYDIQALAQTASQLNAVIGRMELFTADNKAKVVVDYAHTP
DALDKALQALRVHCEGKLWCIFGCGGDRDTGKRPMMASIAEQQADVIILSDDNPRSEEPS
LITNDMLAGLKNSESAHVIHDRFEACQFALSQANENDIILLAGKGHEDYQVLADKTVYYS
DRETAQTLLGLQS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagttatctgaattactgttgtcttggtgcgagttaaatcaatctgtggcaatt
tcatctatgacattggacagtcgccaagtatctcctggctgtttatttgtagcaattaaa
ggccatgcagtagatggtcgccaatttatttcatcagcaattgaacaaggtgctgttgca
gttattgctgacgctgatgaagataatattgcaggaacggtaaaggttatcaataacgct
attgttgtttacattgattctctttatacgcagttaagtgcgattgcaggagctttctat
caagcggataagagatgcatgcaacttgtcggtattactggtactaatggtaaaacgacg
atttctcagatcattgctcaatggacgacattattagatcaacctgctgccgtaatggga
acaacgggtaatggcttactgtcggatcttaagccagccttgaacacaactggtagtcca
attgaaatccaacaaacactgacagagcttgagaatatcggagccaaactgacggcatta
gaagtgtcgtctcatggtttagttcaagggcgtgttaatgcgttatcttttgatgcagca
gtatttactaacttaagccgtgaccatcttgattatcatggtgatatggaaaactatgct
gaagctaaaaagctactttttacttctcataggccaaaacactcaatcatcaatgcggat
gatcaagtgggctgccaatggttaaaagagatgcctcatgccgtcgctgtttctttaaat
gaagaaaacatctcttttcattccggtaagaaggtatttgcaacatcggttgtttattca
accgaaggcattcaactttccgtttcttcagattggggaaatgttgctttttcagtgcct
ttaattggagcatttaacgcgagcaatattctcgttgctttcgcaacacttctttcttta
ggttatgacatccaagctttagctcaaacggcgtctcagctgaatgcagttattggcaga
atggagttgtttactgcagataataaagccaaagtggttgtcgattatgcgcatacgcct
gatgctttagataaagcgttgcaagcattacgagttcattgtgaaggtaagttgtggtgt
attttcggctgtggtggcgatagagatacagggaaacgaccaatgatggcaagcattgct
gagcaacaagcagatgtgattatcttaagtgatgataatcctcgttcagaagaaccaagc
ttaattactaatgatatgctggctggattaaaaaattctgaatctgcacatgttattcat
gatcgctttgaagcttgtcagtttgcattatctcaagcaaatgagaacgatatcatttta
cttgccggtaaagggcatgaagattatcaagtgttagcggataagaccgtttattactct
gatcgtgaaaccgcacaaacattattagggctacaatcatga
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