Vagococcus fluvialis: K5K99_07675
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Entry
K5K99_07675 CDS
T07851
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vfv
Vagococcus fluvialis
Pathway
vfv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K5K99_07675 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfv03400
]
K5K99_07675 (nth)
Enzymes [BR:
vfv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K5K99_07675 (nth)
DNA repair and recombination proteins [BR:
vfv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K5K99_07675 (nth)
Prokaryotic type
K5K99_07675 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UDM72852
LinkDB
All DBs
Position
1477880..1478533
Genome browser
AA seq
217 aa
AA seq
DB search
MLSGKRTVEALNRMELMYPDAKGELNHETPFQYLIAVILSAQATDVSVNKVTPGLFASYP
TAKDLAKASLEDVMSKIRTIGLYKNKAKNIIKTSQMLVELYDGEIPETIKELVKLPGVGI
KTANVVAGDMFGVPAIAVDTHVERVAKRLRISKQSASVNEVEEVLMKKIPRERWVQAHHT
IILFGRYHCTARSPKCDACPLLDLCLEGQRNMKKKEK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgttatcaggaaaaagaacagtagaggctcttaataggatggagctaatgtacccagat
gctaaaggagaattaaatcatgaaacaccttttcaatatttaattgccgttattctaagt
gcacaagcaacagacgtttctgttaataaagtaaccccaggactttttgcgagttatcca
acagcaaaagatttagcaaaagcctcattagaagatgtgatgtcaaaaattagaacgatt
ggactttacaaaaataaagctaaaaacatcatcaaaacctctcaaatgttggtagagctt
tatgacggtgaaataccagaaacaattaaagagttggttaagctaccaggagtaggaatt
aaaacagctaatgtggttgcaggagatatgtttggtgttccagcaatagcagttgatact
cacgttgaaagagtggctaaacggttaagaattagcaaacaatcagctagtgtaaatgaa
gtagaggaagtattaatgaaaaagataccaagagaaagatgggttcaagctcatcatact
attattctttttggtagatatcattgtacagcaagatcacctaagtgtgatgcatgtccg
ttacttgatttatgtcttgaaggccaaagaaatatgaagaaaaaagagaagtaa
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