Viruses: 18560221
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Entry
18560221 CDS
T40000
Symbol
rnlA, CL89_gp181
Name
(RefSeq) Aeromonas phage PX29; RNA ligase and tail fiber protein attachment catalyst
KO
K18961
Straboviridae RNA ligase 1 [EC:
6.5.1.3
]
Virus
926067
Aeromonas phage PX29
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
T4_Rnl1_C
RNA_lig_T4_1
DUF842
Motif
Other DBs
NCBI-GeneID:
18560221
NCBI-ProteinID:
YP_009011726
RS:
NC_023688
UniProt:
E5DQN0
LinkDB
All DBs
Position
NC_023688:complement(189243..190412)
AA seq
389 aa
AA seq
DB search
MQSIKELYQNLINLCVDDNTKFYFADTVTSLGTKVRIFDYHVAGYNDWIRPDAMACRGIM
FEMNGEIPVRIMSRPMDKFFNYSEVIGWEKLETAGNMKMPDLSKIKFVIDKRDGSLISTF
MDVSGDTKNLLLKSKASIRSNQANDASVWLYQEDHKDLLDFCTLYAENGFTVNMEWTAPH
NQIVLCYNEHQLRILNIRHNETGEFVDFNELMKDQTFVKYAADFFEVPQDGKAWIESVFA
MTGIEGFVVVMEDYQMFKLKTDWYVALHHTKDSINNSERLIYACAENCTDDLRQMFRDDE
NSLQKIEIFDAHFRDVMMNAMNKLTAAYEKCRGMERREYAITMNDGFKNERHWFNIAMQM
FAQRPEFNMVDEIVAVVKKYPKTFIPKGY
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtatcaaagagctgtatcaaaatcttattaatctgtgtgttgacgacaacacc
aagttttatttcgccgacaccgtgacttctctcggtaccaaagttcgcattttcgattat
catgtagcgggttataacgattggattcgtccggatgctatggcttgtcgcggtatcatg
ttcgaaatgaacggcgaaattccggtgcgtatcatgagccgtccgatggacaaattcttc
aactacagcgaagttatcggttgggaaaaactggaaactgctggtaacatgaaaatgccg
gatctgagtaagatcaagtttgttatcgacaagcgcgacggctccttgatctctactttc
atggacgttagcggcgataccaaaaatctgctgctgaaatccaaagcttctattcgcagc
aatcaagcgaatgatgccagcgtgtggctgtatcaagaagatcataaagatctgctggat
ttctgtactctgtatgccgagaatggtttcaccgtgaacatggagtggactgccccgcac
aatcagatcgtcctgtgctacaatgaacaccagctccgtattctgaacattcgacacaac
gaaaccggcgagtttgttgatttcaacgaactgatgaaagatcaaacttttgttaagtac
gctgccgacttctttgaagtaccgcaagacggaaaagcttggatcgaatctgtgttcgct
atgactggcatcgaaggtttcgtggtagttatggaagactatcaaatgttcaagctgaaa
accgattggtatgttgcactgcatcacaccaaagacagcatcaacaacagcgaacgactg
atctacgcttgtgccgaaaactgcaccgacgatctgcgtcagatgttccgcgatgatgaa
aacagtctgcaaaagatcgagatctttgacgctcatttccgtgacgtcatgatgaacgca
atgaacaagctgaccgctgcttatgaaaagtgccgtggtatggaacgtcgcgagtacgct
atcaccatgaacgacggtttcaagaacgagcgccattggttcaatatcgccatgcagatg
ttcgcacaacgaccggaattcaacatggtagacgaaatcgtggctgtggttaagaagtac
ccgaaaacctttatcccgaaaggctactaa
DBGET
integrated database retrieval system
