Viruses: 29067409
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Entry
29067409 CDS
T40000
Symbol
BI097_gp097
Name
(RefSeq) Shigella phage SHSML-52-1; RNA ligase and tail fiber protein attachment catalyst
KO
K18961
Straboviridae RNA ligase 1 [EC:
6.5.1.3
]
Virus
1863011
Shigella phage SHSML-52-1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
T4_Rnl1_C
RNA_lig_T4_1
Motif
Other DBs
NCBI-GeneID:
29067409
NCBI-ProteinID:
YP_009289058
RS:
NC_031090
UniProt:
A0A193H2F3
LinkDB
All DBs
Position
NC_031090:65109..66233
AA seq
374 aa
AA seq
DB search
MEKLYYNLLSLCKSSSDRKFFYSDDVSPIGKKYRIFSYNFASYSDWLLPDALECRGIMFE
MDGETPIRIASRPMEKFFNLNENPFTLSINLDDVKYLMTKEDGSLVSTYLDGGTVRFKSK
GSIKSDQAVSATSILLDIDHKNLADRLLELCNDGFTANFEYVAPTNKIVLSYPEKRLILL
NIRDNNTGEYIEYDDIYLDPVFRKYLVDRFEVPEGDWASDVKSSTNIEGYVAVMKDGSHF
KLKTDWYVALHTTRDSISSPEKLFLAIVNGASDDLKAMYADDEFSFKKVELFEKAYLDFL
DRSFYICLDTYDKHKGKDRKTYAIEAQAVCKGAQTPWLFGIIMNLYQGGSKEQIMTALES
VFIKNYKNFIPEGY
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctttattataatctgttatctctgtgtaaatcgtcatccgaccgtaaattt
ttctactcggatgatgtaagtccaatcggtaaaaagtatcgtattttctcatataacttt
gcttcatattcagattggttattgcctgacgcgttagagtgtcgtggtattatgttcgaa
atggatggtgaaactcctatacgtattgcttctcgtccaatggaaaaattctttaatcta
aatgagaacccgtttacattgtcaattaaccttgatgatgtaaaatatctgatgactaaa
gaagacggttcgttagtctcgacatatcttgatggcgggactgttcgtttcaaatctaaa
gggtcaatcaaatccgaccaggctgtatcggctacaagtattttgttagacatcgaccat
aaaaacttggctgatcgtttattagaactttgtaatgacgggttcactgctaacttcgaa
tacgttgctccaacaaataaaattgttttatcataccctgaaaaacgattgattcttttg
aatattcgcgataacaacacaggcgaatacattgagtatgatgacatttatctagaccct
gtttttcgtaaatatcttgtagatcgatttgaagtaccagaaggcgactgggcctcagat
gttaagtcttctacaaatattgaagggtatgtggccgtaatgaaagacgggtctcatttc
aaattgaagactgattggtatgttgctcttcatacgactcgagactcaatctctagtcca
gaaaagttgtttcttgctatagtgaacggtgcttcagatgaccttaaagcgatgtacgca
gatgacgagttttcatttaaaaaggtcgagctcttcgaaaaagcatatcttgatttctta
gaccgctcattttatatctgtctagatacatatgataagcacaaaggaaaagatcgtaaa
acgtatgctatagaagctcaggctgtttgtaagggtgcacagacaccttggttatttggc
atcattatgaatctttaccaaggtggttcaaaagagcaaattatgactgctctagaatcg
gtctttattaaaaattataaaaatttcatacctgaaggatattaa
DBGET
integrated database retrieval system
