Viruses: 9384516
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Entry
9384516 CDS
T40000
Symbol
rnlA, IME08_gp215
Name
(RefSeq) Escherichia phage IME08; RNA ligase and tail fiber protein attachment catalyst
KO
K18961
Straboviridae RNA ligase 1 [EC:
6.5.1.3
]
Virus
698728
Escherichia phage IME08
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
T4_Rnl1_C
RNA_lig_T4_1
DsrD
Motif
Other DBs
NCBI-GeneID:
9384516
NCBI-ProteinID:
YP_003734366
RS:
NC_014260
UniProt:
D7RMM9
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Position
NC_014260:complement(140884..142032)
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AA seq
382 aa
AA seq
DB search
MIELYDNLMALVKNSTKSKFFFKDFQSALGVNYRIFSYNYASYSDWLEDGALECRGIMFE
MDENGPVRIAARPMQKFFNLDENPLTIGLDLSPENIDLVMAKEDGSLISTFMDRQYLSVK
SKGSIHSSMVHDSLRFLRLPENEAFAARLEEITKAGYTCNLEYVAPTNRIVLAYQETNLI
LLNVRNNETGEYIPYAELFKDGALRKHLVESYDLTEGDFVENIRKQEGIEGFIFVLKDGT
FFKLKTAWYSALHHTKDSINNNERLFEVVVAGGTDDLRGLFSTDSFAIEKIDAFERIHLD
YLEQSLALLEAAYSQLKGRDRKDYAVTGQLILKDFPGLFSILMQAYVGGINYDTVVDQIN
SVFLKNHKAQIPEKYLKEIVVE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgattgaattatatgataacttgatggccctggttaaaaactcgactaaatctaagttc
ttctttaaagactttcagagtgcgctaggagtcaactatcgcatctttagttataactat
gcatcgtacagtgattggttggaagacggcgcactagagtgccgtggcattatgtttgaa
atggacgagaacggtccggtacgtattgctgctcgtcctatgcaaaagttctttaacctt
gacgaaaacccactgactatcggtctagatttgtcgccagaaaatatcgacctcgtaatg
gctaaggaagatggttctctgatttctacattcatggaccgacagtatctttctgttaaa
tctaaaggctctatccattcatcaatggtgcatgattctttacgcttccttcgtctccct
gagaacgaggcttttgccgcacgtctagaagaaatcaccaaagctgggtatacctgcaac
cttgaatatgttgcacctaccaaccgtatcgtgctggcttaccaagaaacaaacctcatc
ctgttgaatgttcgtaataatgaaacaggtgaatatattccgtatgccgaactgtttaaa
gatggggccctgcgtaagcatttggttgaaagttatgacctcactgaaggtgatttcgta
gaaaacatccgtaaacaagagggtattgaaggtttcatctttgtactgaaagatggtacg
ttctttaaactcaaaactgcctggtacagtgcattgcatcataccaaagattccattaac
aataacgaacgtttgtttgaagttgtagtggcaggtggaactgacgaccttcgtggtctg
ttcagtacagattcgtttgctatcgagaaaatcgatgcctttgaacgcatccatttagat
tacctagaacaatcattggctttgttggaagcagcgtattcccaactcaagggccgcgac
cgtaaagactatgccgttaccggacagctaatccttaaggacttcccagggttgttctct
attcttatgcaggcgtacgtaggcggtattaattatgatacggttgtagaccagattaac
tcggtgttcttgaaaaaccataaagcccaaatccctgaaaaatatttgaaagaaattgtg
gtagagtag
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