Vibrio gigantis: MID13_20665
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Entry
MID13_20665 CDS
T08202
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vgi
Vibrio gigantis
Pathway
vgi01501
beta-Lactam resistance
vgi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MID13_20665
01503 Cationic antimicrobial peptide (CAMP) resistance
MID13_20665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vgi03036
]
MID13_20665
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vgi02000
]
MID13_20665
01504 Antimicrobial resistance genes [BR:
vgi01504
]
MID13_20665
Chromosome and associated proteins [BR:
vgi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
MID13_20665
Transporters [BR:
vgi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
MID13_20665
Antimicrobial resistance genes [BR:
vgi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MID13_20665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
PTS_EIIA_1
Phage_spike_2
bZIP_Maf
Motif
Other DBs
NCBI-ProteinID:
ULN66005
LinkDB
All DBs
Position
2:complement(1169273..1170463)
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AA seq
396 aa
AA seq
DB search
MSKYKGVIVGSALFILLSFVFGFHYVKSEIIKEKVASFKLPATSVTTEVVNEDVWNEHLN
VIGNIHANQSVDVTSQISGQVKEVLFKSGQFVNKGDVLVKLDDALLKANYKSQLAKVELA
RTELKRNRRLLKNNSVSQSSVDKLAAQFNAESAKLEYISTQVEYMKVKAPFSGHVGIRKI
DVGDFINTSTAIVDLEDNSIQYVDFSISELYLHSVKVGQDLQFKSDAANDAEYHATITAI
EPSSDANTHNIELRAVITQPVPLESGMYVDATLTTSDSTSVISVPSVAISYTLSGDTVFV
LDTSTKQVSTNSGSASSDDKDSSSQGSEKAETPFYEYKVVQRTVEIGPKQGGYVGVISGL
KEGDVVVTSNQHQLKNGGLVLVNNQRPLVTNTKPSK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtataaaggcgtaattgtcgggtcagctttatttatactgttgtcttttgta
tttggctttcattacgttaaaagcgaaataataaaagaaaaagtagcaagttttaaatta
ccagcgacatctgtaacaactgaagttgtaaatgaagatgtttggaatgagcatttaaat
gtaattggtaatatccatgctaaccaatcagtagacgtgacgagtcaaatatccgggcaa
gtaaaagaagtgctttttaagtcaggtcaatttgttaataaaggtgatgttctagttaag
ttggatgatgcattattgaaggcgaactacaaaagtcagttggcaaaagtagagttagcg
agaacagagttaaaaaggaacagaaggctattgaaaaataatagtgtctctcagagttcg
gtagataagctagccgctcaatttaatgccgaatcagcgaaattagaatatatctctact
caggttgaatatatgaaagttaaagcgcctttttctggccatgttggaattagaaaaatt
gatgtgggcgactttatcaatacgagcacagcgattgttgatctcgaggataactctata
cagtatgtcgatttttctatttctgagctttatcttcacagtgtgaaagtggggcaggat
ctccagtttaaatctgacgcagctaacgatgctgagtatcacgcaacgattacggcgatt
gaaccaagctcagatgccaatacacataatattgaattgcgcgcggtaattactcaacct
gttccgttggaatcgggaatgtatgtggatgccacgctgaccacttcagattcaacttcg
gtgatcagtgtgccttcagtcgcgatcagctacaccttgtctggcgatactgtatttgtt
cttgatacatcaacaaaacaagtgagtacgaattctggcagcgcaagctctgacgacaaa
gattcaagcagccaaggttcagagaaagcagagacaccattttatgaatacaaagtggtg
caacgtactgttgaaattggcccgaaacagggtggttatgtgggtgttatttctggttta
aaggagggcgacgtggtggtgacatcgaatcaacatcagcttaaaaacggcggtctggtt
ttagtgaacaatcaacgacctcttgttaccaatactaagccaagtaaatag
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