Variibacter gotjawalensis: GJW-30_1_04312
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Entry
GJW-30_1_04312 CDS
T05320
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJW-30_1_04312 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgo03400
]
GJW-30_1_04312 (nth)
Enzymes [BR:
vgo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GJW-30_1_04312 (nth)
DNA repair and recombination proteins [BR:
vgo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GJW-30_1_04312 (nth)
Prokaryotic type
GJW-30_1_04312 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAT61751
UniProt:
A0A0S3Q0M4
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All DBs
Position
complement(4394330..4395151)
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AA seq
273 aa
AA seq
DB search
MVRKATAAKRPAKKPVSKKPPKKVPGKKPARAAVKPVKARANADAAALGGKLKPWTTAEV
TEAFRRFQKVSPEPKGELEHVNAFTLLCAVVMSAQATDAGVNRATRPLFATVDTPEKMVA
LGEDRLREAIKTIGLFRMKAKNVIGLSERLIAEYGGEVPASREALEALPGVGRKTANVVL
NMAYGMPTMAVDTHVFRVGNRTGLAPGKNPLEVELGLEKAIPAEFMLHAHHWLILHGRYV
CKAQRPLCETCIINDLCRWPGKTVLDGNMAVNR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaaaagcgacagccgcgaaacgcccggcaaagaagccggtgagcaagaaaccg
ccgaagaaagttcccggcaagaagcccgcgcgcgctgcggtcaagcccgtcaaagcacgc
gccaatgcggatgcggcggcgctcggcggtaagctcaagccgtggacgacggcggaagtg
accgaagcttttcgccgctttcaaaaggtctcgcccgagccgaaaggtgaactcgaacac
gtcaatgccttcacgctgctgtgcgccgtcgtgatgtcggcgcaggcgacggatgcgggc
gtcaatcgcgcgacgcggccgctattcgccacagtcgatacgccggagaaaatggtcgca
ctcggtgaagatcgcctgcgcgaggcgatcaaaacgatcgggctcttccgcatgaaggcg
aagaatgtcatcggtttgtccgagcgtctgatcgccgaatatggtggcgaagttccggct
tcacgcgaagcattggaagcgctgccgggcgttggccgcaagaccgcgaatgtcgtgctc
aacatggcctacgggatgccgaccatggcggtcgacacgcatgtgtttcgtgtcggcaac
cggaccggcctcgcgccgggcaagaacccgctcgaggtcgagctcgggctcgaaaaagcg
atcccggccgagttcatgctgcacgctcaccactggctgatcctgcatgggcgttacgtc
tgcaaagcgcagcggccgctgtgcgagacctgcatcatcaacgatctctgccgttggccc
ggaaaaaccgtgctcgacgggaatatggccgttaaccggtaa
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