Vallitalea guaymasensis: HYG85_12420
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Entry
HYG85_12420 CDS
T07172
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vgu
Vallitalea guaymasensis
Pathway
vgu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HYG85_12420 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgu03400
]
HYG85_12420 (nth)
Enzymes [BR:
vgu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HYG85_12420 (nth)
DNA repair and recombination proteins [BR:
vgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HYG85_12420 (nth)
Prokaryotic type
HYG85_12420 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
Ogg-HhH
Noelin-1
Motif
Other DBs
NCBI-ProteinID:
QUH29661
UniProt:
A0A8J8MB57
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All DBs
Position
2820507..2821163
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AA seq
218 aa
AA seq
DB search
MANNKTIKKVLNLLDENYPKDIKCYLDHENPWQLLIATILSAQCTDDRVNIVTKDLFRKY
TSVKDFAEADISELEQDIRSTGFYRNKAKNIIGCCRTLLEQHDGQVPKDIEKLVKLQGVG
RKTANVIRGNIYNIPSIVVDTHVKRISKKLGFTEYTDPVKIEFDLMEILPKEHWIRYNTQ
VIAHGRAICTARSPKCERCFLLPYCKTGLENMINVIDE
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataataagacgataaaaaaggttcttaacttattagatgagaattatcccaaa
gacataaaatgttatttagaccatgaaaacccttggcaattacttattgctactatatta
agtgctcaatgtactgacgatagagttaatattgtaactaaagatttattcaggaaatac
acatctgtcaaagattttgctgaagcagatataagtgaactggaacaagatattagatca
actggtttctatagaaataaagctaagaacattattggatgttgtaggacattattagaa
caacatgatggacaagtcccgaaggatatagagaaactagttaaacttcaaggggtaggg
agaaagacagctaatgtaattagaggaaatatctataatatcccaagcatagttgtagat
acacatgtaaaacgtatatcaaaaaaattaggattcactgagtatactgaccctgttaag
atagaattcgatttgatggaaatattgccaaaagagcattggattagatataatacccaa
gtaattgctcatggacgagctatatgtactgctagaagtccaaaatgtgaaagatgtttt
ttactaccttattgtaaaacaggacttgagaatatgattaatgttattgatgaataa
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