Vibrio campbellii ATCC BAA-1116: VIBHAR_00392
Help
Entry
VIBHAR_00392 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K00604
methionyl-tRNA formyltransferase [EC:
2.1.2.9
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha00970
Aminoacyl-tRNA biosynthesis
vha01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VIBHAR_00392
Enzymes [BR:
vha01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.9 methionyl-tRNA formyltransferase
VIBHAR_00392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Formyl_trans_N
Formyl_trans_C
Tospo_nucleocap
Motif
Other DBs
NCBI-ProteinID:
ABU69407
UniProt:
A7N122
LinkDB
All DBs
Position
I:374520..375467
Genome browser
AA seq
315 aa
AA seq
DB search
MSQSLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKTIALEHD
IPVYQPENFKSDEAKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRG
AAPIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDAL
IDCLADIAAGKAKPVKQDDELANYAKKLSKEEARIDWNDDAAHIERCVRAFNPWPMSHFE
AAENSIKVWQSRVEEQTSDKPAGTILQADKTGIYVVTGNGVLVLEQLQVPGKKAMSVQDI
LNSRASWFEVGTQLV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcagtctttacgtattgtctttgcaggtactccggatttcgccgcccgtcacttg
gcggcgttgttgtcttcggagcacgaagtaattgcggtttacactcaaccagaccgccca
gcaggtcgtggtaagaagcttactgcaagcccagtaaaaaccatcgcgcttgagcacgac
attccggtatatcaaccagaaaacttcaaatcagacgaagcaaagcaagagcttgccgat
ctgaacgccgacatcatggtagttgttgcttacggcttattacttccacaagttgtacta
gacacacctaaactaggttgtatcaacgtacacggttcgattcttcctcgctggcgcggc
gcggcccctatccaacgttcaatttgggcaggtgatgcagaaactggcgtaaccatcatg
cagatggatatcggtctggacacgggtgacatgctaaaaatcgcgacattgccgattgaa
gcaagtgacaccagtgcgtcgatgtacgagaaactggctggcttaggcccagatgcactg
atcgactgtctagcagatatcgccgctggcaaagcaaagccagtgaagcaagatgacgag
ctagcaaactacgcgaagaagctgagcaaagaagaagcacgtatcgattggaatgacgac
gcggcacatattgaacgctgtgttcgcgcattcaacccatggccaatgagccactttgaa
gccgctgaaaacagcatcaaggtatggcaaagccgtgttgaagagcaaaccagcgacaaa
cctgcgggcaccatcttgcaagcagataagaccggtatctatgttgtgacaggcaacggc
gtattggtactggaacaactgcaggttccgggtaaaaaagccatgtcagttcaagatatt
ctgaactcacgtgcatcttggtttgaagttggcactcaactggtttaa
DBGET
integrated database retrieval system
