Vibrio sp. STUT-A11: VspSTUT11_25410
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Entry
VspSTUT11_25410 CDS
T10419
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
vib Vibrio sp. STUT-A11
Pathway
vib00540
Lipopolysaccharide biosynthesis
vib01100
Metabolic pathways
Module
vib_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VspSTUT11_25410 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vib01005
]
VspSTUT11_25410 (lpxC)
Enzymes [BR:
vib01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
VspSTUT11_25410 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
vib01005
]
Lipid A
VspSTUT11_25410 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
BDR14565
LinkDB
All DBs
Position
1:complement(2889765..2890682)
Genome browser
AA seq
305 aa
AA seq
DB search
MIRQRTLKEIVKTTGVGLHSGRKVTLTLRPAAANTGIIYRRTDVNPPVDFPADPASVRDT
MLCTALVNDQGVRISTVEHLNAALAGMGIDNIVVEVDAPEIPIMDGSASPFVYLLQQAGI
EMQNAPKRFIRIKKPVRFEDGDKWAEFVPFNGFRMDFEIDFNHPAIESDEQRLLFDFSSK
GFVREISRARTFGFMRDIEYLQSQNLVLGGSFDNAIVLDDYRILNEEGLRFDNEFVTHKV
LDAIGDLYMCGHPIIGEFRAFKSGHGLNNQLLRAVLADQEAWEWTTFEEEAGSPVAFAEP
NMVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacaacgtactctgaaagaaatagtgaaaacaactggtgtgggtctccactct
ggtcgtaaagtcacgcttactctgcgcccagctgctgcaaacacaggtattatttaccgt
cgtaccgatgtaaaccctcctgtagatttcccagctgatccagcgtctgttcgtgacact
atgctatgtaccgcactagtgaacgatcaaggcgtgcgtatctcaacggttgagcactta
aatgctgcacttgctggtatgggcatcgataacattgttgttgaagtcgacgcgccagaa
attccaattatggatggtagtgcaagcccatttgtatatctgcttcagcaagcgggtatc
gaaatgcaaaatgctcctaagcgtttcatccgtattaaaaaaccagttcgtttcgaagat
ggcgataagtgggcagagtttgttccatttaacggtttccgtatggactttgagattgac
tttaaccaccctgcaatagaatcagatgagcagcgtttactgtttgatttctcatctaaa
gggttcgttcgtgagatttctcgtgcacgtacgtttggttttatgcgtgatatcgaatat
ctacaatctcagaacctagttttgggtggtagctttgataacgctatcgtactggatgat
taccgaattcttaatgaagaaggtctgcgttttgacaatgagttcgttactcataaagtg
ttggacgccattggtgacctttacatgtgtggccacccgattattggtgaattccgtgca
tttaaatcaggtcacggtctaaacaaccaacttctacgtgctgttctggctgaccaggaa
gcatgggaatggacaacattcgaagaagaagccggttctccagtcgcatttgcagagcca
aacatggtactagcataa
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