KEGG   Vibrio sp. STUT-A11: VspSTUT11_45590
Entry
VspSTUT11_45590   CDS       T10419                                 
Symbol
dgcA
Name
(GenBank) dimethylglycine catabolism protein DgcA
  KO
K21833  N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
Organism
vib  Vibrio sp. STUT-A11
Pathway
vib00260  Glycine, serine and threonine metabolism
vib01100  Metabolic pathways
Module
vib_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:vib00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    VspSTUT11_45590 (dgcA)
Enzymes [BR:vib01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.7  With an iron-sulfur protein as acceptor
    1.5.7.3  N,N-dimethylglycine/sarcosine dehydrogenase (ferredoxin)
     VspSTUT11_45590 (dgcA)
SSDB
Motif
Pfam: Oxidored_FMN Pyr_redox_2 FAD_oxidored NAD_binding_8 Pyr_redox FAD_binding_2 HI0933_like DAO GIDA Thi4 AlaDh_PNT_C FAD_binding_3 Pyr_redox_3 NAD_binding_7 3HCDH_N Dus
Other DBs
NCBI-ProteinID: BDR16583
LinkDB
Position
2:complement(1799305..1801368)
AA seq 687 aa
MSQFDILFQPLKINKTTIRNRVVSTAHAEVYATDGGMTTDRYVKYYEEKAKGGCGLCICG
GSSVVSIDSPQSWWSSVNLSTDRIIPHFQNLADAVHKHGGKIMIQITHMGRRSRWDGEHW
PNLMSPSGVREPVHRATCKTIEEEEIWRIIDDFAKAAVRAKEGGLDGVELSAVHQHMIDQ
FWSPRVNKRTDQWGGSFENRMRFGMEVLKAVREAVGPDFVVGMRITGDEFHPDGLNHDDM
KEIAAYYDATKMVDYFGVVGSGCDTHNTLANVIPNMSYPPEPFLHLAAGIKEVVSVPVIH
AQNIKDPNQAKRILEAGYVDFVGMTRAHIADPHLITKIKLGQTDQIRQCVGANYCIDRQY
MGLDVLCIQNAATSREHMGMPHLIEKTTGSIRKVVVIGGGPGGMEAARVAAERGHKVTLV
EKASELGGQITIAAKAPQRDQMAGITRWLAMELDRLGVEVILETAANADMIRELKPDVCI
LATGGTPFIEQNPDWGAEEGLVVSSWDILNGTVEPGKNVLVYDTICEFSGMSAADYLTSK
GSQVELVTDDIKPGVGIGGTTFPTYYRSLYEKEVIMTSDLALLKVYREGDNLIALLENEY
TGAKEERVVDQVVVENGIRPNEALYYELKAESVNKGQIDVETLFASQAQPVLSQDNDGMI
LWRLGDCVSQRNTHAALYDALRLCKDL
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgtctcagttcgatattctattccaaccattaaaaattaacaaaacgaccattcgtaac
cgtgttgtcagtactgcacacgcagaagtttatgccaccgacggtggtatgacgactgat
cgctacgtaaaatactacgaagaaaaagccaaaggtggctgtggtctatgtatctgtggc
ggttcaagtgtggtttcaattgatagcccacaaagctggtggagctcagttaacctttca
accgatcgcatcattcctcatttccaaaatctagccgatgctgtgcacaagcatggcggc
aaaatcatgattcagattactcacatgggacgtcgttctcgttgggatggtgagcattgg
ccaaacctgatgtctccatctggcgtacgtgagccggttcaccgcgcaacatgtaagact
attgaagaagaagaaatctggcgcatcatcgacgacttcgcgaaagcggcagttcgcgca
aaagaaggtggtctggacggcgttgagctatctgcagttcaccagcacatgatcgaccaa
ttctggtcgccacgtgttaacaagcgtactgaccaatggggtggaagctttgaaaaccgc
atgcgctttggtatggaagtactaaaagcggtacgtgaagcggttggtcctgactttgtt
gtcggtatgcgtattacgggtgatgagttccatcctgatggtttgaaccatgacgacatg
aaagaaatcgcggcgtactacgatgcaactaagatggtcgattacttcggcgttgttggt
tctggttgtgatacgcacaacacgctagcaaacgttatccctaacatgagctacccgcca
gagccattccttcacttggcggctggtattaaagaagtggtttcagtaccagttatccac
gcgcaaaacatcaaagacccaaaccaagcgaagcgtattcttgaagcgggttacgttgat
tttgttggtatgactcgtgcgcatattgcggatccacacttgatcaccaaaattaaacta
ggtcaaaccgatcagattcgccaatgtgttggcgcgaactactgtatcgaccgtcagtac
atgggtctagatgtattgtgcatccagaacgcggcgacatcccgtgagcacatgggcatg
cctcacctgatcgaaaaaacaactggatctatccgtaaagttgttgtgattggtggtggc
cctggtggtatggaagcagcacgtgttgcggctgagcgtggtcataaggttactctagtc
gaaaaagcgagtgagctaggtggacaaatcaccatcgcagcgaaagcaccgcaacgtgat
cagatggctggtatcacacgttggttggcaatggagttagaccgtcttggcgttgaagtt
atcctagagactgcagctaacgcggacatgattcgtgaacttaaacctgatgtttgtatt
cttgcaactggtggtacgccattcatcgaacagaacccagactggggtgcagaagaaggc
ttggttgtgtcttcttgggatatccttaacggcacagttgaaccgggtaagaatgttctg
gtttacgacacaatctgtgaattctctggtatgtcggcggcagattacctgacttctaaa
ggctcacaagttgaactcgttactgatgatatcaaaccaggtgttggtatcggtggtacg
acgttcccaacttactaccgtagtttgtatgagaaagaagtcatcatgacttcagacctt
gctctgctgaaagtataccgtgaaggtgacaacctaatcgctctgctagagaacgaatac
acgggtgcgaaagaagaacgcgttgttgaccaagtggtagtagaaaacggcattcgtcca
aatgaagcgctttactacgagttgaaagctgagtcagtaaacaaaggccaaatcgacgtt
gaaaccttgtttgcatcacaggcgcaaccagtcctatctcaagacaatgacggcatgatc
ctatggcgcttgggtgactgtgtttcacagcgtaatactcacgctgcactctacgatgca
ctacgtctatgtaaagatctgtaa

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