Vibrio iocasae: SNR28_20660
Help
Entry
SNR28_20660 CDS
T11169
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vic Vibrio iocasae
Pathway
vic01501
beta-Lactam resistance
vic01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SNR28_20660
01503 Cationic antimicrobial peptide (CAMP) resistance
SNR28_20660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vic03036
]
SNR28_20660
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vic02000
]
SNR28_20660
01504 Antimicrobial resistance genes [BR:
vic01504
]
SNR28_20660
Chromosome and associated proteins [BR:
vic03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SNR28_20660
Transporters [BR:
vic02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SNR28_20660
Antimicrobial resistance genes [BR:
vic01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SNR28_20660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
XHF83876
LinkDB
All DBs
Position
2:complement(2415956..2417062)
Genome browser
AA seq
368 aa
AA seq
DB search
MKKNTLKAICLSVAIAVSYPTDAFAKGQGRAGKPAGARSTLVVTEQVDVHEISQTLTLIG
KLKAEESVIISPEVSGQIDQINVSANQKVTRGQLLVQLNDDKVRAALAEAEAYLKDEQRK
LQEFIRLSKRGAITQTEIDAQKASVDIASARLAAEKANLKDMNITAPFDGTVGFIDFSRG
KMVSAGYELLTLDNLSNMQLDLNVPERYLPMLAEGMKVKAASNAWGGEVFNGKVSGVDTR
INSETLNLRVRINFENIESKLKPGMLMSADLEFPPIKAPIVPVQSLQYSGTKRYVYVVDD
NNKAHKTEVILGARVDNEVVIEKGLEVGDRIVVQGLVNMRDGASVKELGDQAAKPQGKPN
QEQKKDNS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaatactttaaaggcgatatgtctttctgtagcaattgctgtttcgtatcct
accgatgctttcgccaaagggcagggtagagccggaaagccagcgggcgctcgttcaacg
ttagttgtcactgaacaggttgatgtgcacgaaatttctcaaacgttaacactgataggc
aaactcaaggctgaagagtctgtgattatttcgccggaagtatcaggacaaatagatcag
ataaacgtgtcagcgaatcaaaaagtgacgcgcggacaactgttagtacagttaaatgac
gacaaagtacgtgcggcccttgctgaagcagaagcatacttaaaagatgaacagcgaaaa
ctgcaagagtttatccggttatctaagcgcggagccattactcaaaccgaaatcgatgct
cagaaggcaagtgtcgacattgccagtgcaaggctggcggcagaaaaagccaatctcaaa
gatatgaacatcacggctccctttgatggcactgtcggatttatcgattttagccgaggg
aaaatggtgagcgctggttacgaactgcttacactggataacctttctaatatgcaatta
gatctaaatgtcccagaacgttatttgccaatgcttgctgaaggtatgaaggtaaaagcg
gcctcaaatgcatggggtggagaggtgttcaacggcaaggtttcaggtgttgatacgcgc
attaacagtgaaactctaaaccttagagtaagaatcaattttgaaaacatcgaatccaag
cttaagcctgggatgttgatgtctgctgatcttgaattcccaccgataaaagcaccaatt
gtacctgtccagtctctgcaatattctggtactaagcgttacgtgtatgttgtagatgac
aataacaaagcgcataaaacagaagtgatacttggtgctcgcgtcgataatgaagtggtt
atcgaaaaaggtctggaagttggtgaccgaatcgttgttcagggtttggttaacatgcgt
gatggcgcgagcgtaaaagagcttggtgatcaggcagcaaaaccacaaggcaaaccaaac
caggaacagaagaaggataattcataa
DBGET
integrated database retrieval system
