Vibrio iocasae: SNR28_21080
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Entry
SNR28_21080 CDS
T11169
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vic Vibrio iocasae
Pathway
vic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SNR28_21080 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vic03400
]
SNR28_21080 (nth)
Enzymes [BR:
vic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SNR28_21080 (nth)
DNA repair and recombination proteins [BR:
vic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SNR28_21080 (nth)
Prokaryotic type
SNR28_21080 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XHF83951
LinkDB
All DBs
Position
2:2492067..2492708
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AA seq
213 aa
AA seq
DB search
MNNTKRVEILKRLRDNNPNPETELNWNTPFELLIAVLLSAQATDVSVNKATDKLYPVANT
PEDILALGVDGVKEYIKTIGLFNSKAENVIKTCKILIEKHNSEVPENREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIYRVSNRSKFAMGKTVDDVENKLLKVVPKEFKLDVHHWLI
LHGRYTCIARKPRCGSCIIEDLCEFKDKVYPDN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatacaaagagagtagaaattctcaagcggttgagggataacaacccaaatccg
gaaacggagctcaactggaatacaccgtttgaattgctaattgcagtattgttgtctgct
caggcaacagatgtaagcgtaaacaaggccacagataaactgtaccctgtcgcgaacaca
cctgaagatatcttggcgttgggtgttgatggcgttaaggagtacatcaaaacaatcggg
ctgtttaactctaaagcagagaacgtcattaagacttgtaaaattcttattgaaaagcac
aacagtgaagttcctgaaaacagagaagcacttgaagcactaccaggggtaggacgcaaa
acagctaacgttgtactcaacacagcctttggttggccaactattgcagtggacacgcat
atctaccgtgtttcaaatcgctcaaaattcgcaatgggtaaaacagtggatgacgttgag
aacaaacttcttaaggtcgtaccaaaagagttcaaactggatgtgcatcactggcttatc
ttgcacgggcgttatacctgcatcgccagaaaaccacgctgtggtagctgtattattgaa
gatttatgtgagtttaaagacaaagtctatccagacaattaa
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