Vibrio iocasae: SNR28_23830
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Entry
SNR28_23830 CDS
T11169
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
vic Vibrio iocasae
Pathway
vic00540
Lipopolysaccharide biosynthesis
vic01100
Metabolic pathways
Module
vic_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SNR28_23830 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vic01005
]
SNR28_23830 (lpxC)
Enzymes [BR:
vic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
SNR28_23830 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
vic01005
]
Lipid A
SNR28_23830 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Ant-IIb_sub-bd
Motif
Other DBs
NCBI-ProteinID:
XHF84455
LinkDB
All DBs
Position
2:complement(3080595..3081512)
Genome browser
AA seq
305 aa
AA seq
DB search
MIRQRTLKEIVKTTGVGLHSGRKVTLTLRPAAANTGIIYRRTDLEPAVDFPADPDSVRDT
MLCTALVNDEGVRISTVEHLNAALAGMGVDNVIIEVDAPEIPIMDGSASPFVYLIQSAGI
EVLNTPKRFIRIKKPVRVEDGDKWAELVPYNGFRMDFEIDFNHPAIESDEQRMLFDFSSN
AFVKDISRARTFGFMKDIEYLQSQNLCLGGSFDCAIVLDEYRILNEEGLRFDNEFVTHKV
LDAIGDLYMGGHSIVGELRAFKSGHGLNNKLLRAVMANQEAWEWATFEEEVGSPVAFAEP
NMVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacaacgtactctgaaagaaatcgtaaaaacgactggggttggtttacactcc
gggcgtaaagttacgcttaccctgcgtcctgcagctgcaaatacaggtatcatttatcgt
cgtaccgacttggaaccagctgtcgattttccggcggatcctgactcagttcgcgataca
atgctatgtacagcactggttaatgacgaaggcgttagaatttcgacggttgaacactta
aatgcagcgcttgctggtatgggtgttgataacgtaatcatcgaagtggatgctcctgag
attccaattatggacgggagtgcgagtccattcgtatacctaatccagtcagctggtatt
gaagtgcttaatacgccaaagcgctttatccgaatcaagaagccagtacgagtagaagac
ggtgacaagtgggccgagctagtgccttacaacggtttccgtatggacttcgaaatagac
tttaaccatcctgcaattgaatcagacgaacagcgcatgctgtttgatttctcttcaaac
gcatttgttaaagatatctctcgagcgcgtacttttggcttcatgaaagatattgagtac
ttgcagtcacaaaacctgtgtcttggtggtagcttcgattgtgcaatcgtattggacgaa
taccgaatcttgaacgaagaaggtcttcgctttgataatgaatttgtaactcacaaagta
ttagatgctattggcgatttatacatgggtggccacagtattgttggtgagcttcgtgct
ttcaaatcaggtcatggtctgaacaacaagcttcttagagctgtaatggcaaatcaagaa
gcatgggaatgggcaacattcgaagaagaagttggttcaccagtcgcatttgcagagcca
aatatggttcttgcttaa
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