Vibrio iocasae: SNR28_24570
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Entry
SNR28_24570 CDS
T11169
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
vic Vibrio iocasae
Pathway
vic00270
Cysteine and methionine metabolism
vic00450
Selenocompound metabolism
vic00670
One carbon pool by folate
vic01100
Metabolic pathways
vic01110
Biosynthesis of secondary metabolites
vic01230
Biosynthesis of amino acids
vic04981
Folate transport and metabolism
Module
vic_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SNR28_24570 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SNR28_24570 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SNR28_24570 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SNR28_24570 (metH)
04980 Cobalamin transport and metabolism
SNR28_24570 (metH)
Enzymes [BR:
vic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
SNR28_24570 (metH)
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GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
XHF84595
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Position
2:complement(3243375..3247052)
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AA seq
1225 aa
AA seq
DB search
MTASNIRKIIEEQLKKRILIIDGAMGTMIQGYKLEEEDYRGERFADWQCDLKGNNDLLSL
TQPKIIEEIYDAYLEAGADILETNTFNATTIAMADYEMESLSEEINYESAKLARRIADEW
TAKTPEKPRFVAGVLGPTNRTCSISPDVNDPGYRNISFDQLVEAYSESTRALIKGGSDLI
LIETIFDTLNAKACAFAVDTVFEELGVKLPVMISGTITDASGRTLSGQTTEAFYNALRHV
NPISFGLNCALGPDELRQYVEEMSRISENYVSTHPNAGLPNAFGEYDLSPEDMAEHIGEW
ADSGFLNIVGGCCGTTPAHIKAIADIVDGKKPRDLPDLPVECRLSGLEPLSIAKESLFIN
VGERTNVTGSARFKRLIKEELYDEALEVARQQVENGAQIIDINMDEGMLDAEACMVKFLN
LCASEPEISKVPIMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFVEQAKLIRRYGA
AVIVMAFDEVGQADTRERKIEICTNAYRVLVDEVGFPPEDIIFDPNIFAVATGIDEHNNY
AVDFIEAVADIKRDLPHAMVSGGVSNVSFSFRGNNYVREAIHAVFLYHCFKNGMDMGIVN
AGQLEIYDNVPDKLREAVEDVVLNRHNDATENLLEIAAEYLEKAVGKQDDASALEWRTWP
VEKRLEHALVKGITEFITEDTEEARQKASRPLEVIEGPLMDGMNVVGDLFGEGKMFLPQV
VKSARVMKQAVAHLEPYINAEKQSGSSNGKILLATVKGDVHDIGKNIVGVVLQCNNFEII
DLGVMVPCEKILKVAKEENVDIIGLSGLITPSLDEMVHVAKEMERQGFDIPLMIGGATTS
KAHTAVKIEQNYSKPVVYVNNASRAVGVCTTLLSDELRPAFIERLDKEYEKVREQHNRKK
PRSKPVTLEQARENKVALDWDTYTPPKPAKPGVHIIEDMDIATLRNYIDWTPFFMTWSLM
GKYPAILEHEEVGEEAKKLFKDANDWLDRVESEKLFTASGICGLFPAANIGDDIEVYTDE
SRTEVSNVLFNLRQQTLKPKGYNYCLSDFVAPKSSDKQDWVGCFAVTGGIGERELADEFK
AKGDDYNAIMVQAVADRLAEAFAEYLHEKVRKEYWGYAPDESFSNEELIRENYQGMRPAP
GYAACPEHTEKQQIWDLLDVENKIGMQLTSSYAMWPGASVSGWYFSHPESKYFAVAQIQQ
DQLEDYAQRKGWSVEEAEKWLAPNL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcaagcaacatccgaaaaataatagaagagcagctgaaaaaaagaatcctgata
atagatggtgctatgggaaccatgattcaggggtataagcttgaggaagaggattaccga
ggagaacgctttgctgactggcagtgtgacctcaaagggaacaatgaccttctttctttg
actcagccaaagatcatcgaagagatctatgatgcctacctggaagctggtgcagatata
cttgagaccaatacctttaatgctaccactatcgcgatggctgactatgagatggaaagc
cttagtgaagaaattaactatgaatcggcaaaactggcaagacgcattgcggacgagtgg
acagctaaaaccccagaaaaacctcgttttgttgccggtgtccttggtccaacaaaccgt
acctgttcaatctcacctgacgtaaacgatccgggttatcgaaatatctcattcgatcaa
cttgttgaagcctactctgaatctacccgcgcactgattaaaggcggttcggatcttatc
cttatagagacgatcttcgatactttgaatgctaaagcttgtgcattcgctgtagacact
gttttcgaagagcttggtgtaaagctgcctgtaatgatctctggaaccattacagatgca
tcgggccgtactctttccggtcagacgacagaagccttctataacgcactgcgccacgta
aatcctatctcctttggtcttaactgtgcactgggaccagatgaattgcgtcaatatgta
gaagagatgtctcgtatctcagagaattacgtttctacccaccctaatgcgggtttacct
aatgcatttggtgagtatgatctctctccggaggatatggcagagcatattggtgagtgg
gctgatagtggtttcctaaatattgtgggtggttgttgtggcacgacaccagcgcatata
aaagctatagcggatatcgttgatggcaagaagcctcgtgacttacctgatctgccagta
gagtgtcgcctttctggtcttgagcctttaagtatcgctaaagagtctctgtttataaac
gttggcgaacggacaaacgtaactggttccgctcgcttcaagcgccttataaaagaagag
ctttacgatgaagcattagaagttgcccgccaacaggttgagaacggtgcccaaatcatc
gatatcaatatggatgaagggatgcttgatgccgaagcttgtatggtaaaattcctgaac
ctatgtgcttctgagcctgaaatctcgaaagtacctatcatggtcgactcatccaaatgg
gaggtcattgaagcgggccttaaatgtattcagggtaaaggcatcgttaactctatctct
ctaaaagagggtaaagagaagtttgtcgaacaggcaaaacttattcgtcgctatggtgcc
gctgtcattgtaatggcttttgacgaagttggtcaggcggatacccgtgaacgtaaaatt
gaaatctgtaccaatgcatatcgagttctggttgatgaagttggcttcccaccggaagat
attattttcgacccaaacatctttgctgtcgctactggtatcgatgagcacaacaattac
gcggtcgattttattgaagctgtagctgatatcaaacgcgatctaccacatgccatggtt
tctggtggcgtgtctaacgtctccttttcattccgaggaaataactacgttcgagaagcg
attcacgcagtgttcctataccactgttttaagaacggtatggacatggggattgtaaat
gccggacaacttgaaatttatgacaatgtacctgataagctccgtgaagcggtagaagac
gtcgtccttaaccgacacaacgatgcaactgaaaacctattggaaattgctgcagagtac
ctcgaaaaagcggtaggtaagcaagacgatgcatcggctcttgagtggagaacctggcca
gtagaaaagcgccttgagcatgcgttggtgaaaggtataactgagtttattaccgaggat
acagaagaggcgcgccagaaggcatccagaccactagaggtaatcgaaggacctttgatg
gatggcatgaacgtggtgggtgatctgttcggtgagggtaagatgttcctacctcaggtg
gttaaatctgcccgtgtaatgaagcaggccgttgctcaccttgaaccttacattaatgct
gaaaaacaatcaggcagctcaaacggtaagatattactggctacggtaaagggtgatgtt
catgacatcggcaaaaacattgttggtgttgttcttcagtgcaataactttgagatcatt
gaccttggcgtaatggttccttgcgaaaagattttgaaagtcgctaaggaagagaatgta
gatattatcggtctgtctggtcttattaccccgtctctggatgagatggttcatgttgct
aaggagatggaacgacagggctttgatattccactaatgattggtggtgcaacaacctct
aaagcccatacagccgtcaagattgagcagaactactctaagcctgttgtttacgtaaat
aatgcgtctcgagcggttggtgtttgtacaacactattatctgacgagctacgtcctgca
ttcattgaaaggctggataaagaatacgaaaaagttcgtgagcagcacaaccgtaaaaaa
cctcgtagcaagccagttacactagagcaggctcgtgaaaataaagtcgctttggattgg
gatacgtacactccacctaaaccagccaagcctggtgttcatatcatcgaagatatggat
attgcgacattgaggaactatatcgactggactccattctttatgacctggtcgctaatg
ggtaaatacccagcgatactagagcatgaagaggttggtgaggaagcgaagaagctgttt
aaagacgctaacgattggctggatcgagtggaatctgagaagttattcacagcaagcggt
atctgtggtttgtttccggctgccaacattggtgatgatattgaagtgtacactgatgag
tctcgcactgaggtctcaaatgttctctttaatttacgtcagcaaactttaaagccgaaa
ggttataactattgtctgtccgatttcgttgcgcctaaatccagtgataaacaagactgg
gttggctgctttgctgtaactggtggtattggtgagcgagagcttgcagatgagtttaaa
gcgaaaggtgacgactacaacgctattatggttcaggctgttgctgaccgattagccgaa
gcttttgcagagtacctacacgagaaggttcgtaaagagtattggggctacgctccagat
gaatcattctcgaacgaagagctgatcagagaaaactatcagggaatgcgtccggctcca
ggctacgcagcttgtccagagcatacagagaagcagcaaatctgggatctactggatgta
gagaacaaaattggtatgcagttaacatctagctacgcaatgtggccaggtgcatccgtt
tctggctggtacttctcacaccctgagtctaagtactttgctgttgctcagatccagcag
gaccagctagaagattatgcacaacgtaaaggttggagtgttgaagaggcagagaagtgg
ctagcgcctaacttgtag
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