Vibrio sp. dhg: DBX26_02115
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Entry
DBX26_02115 CDS
T11094
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
vid Vibrio sp. dhg
Pathway
vid00300
Lysine biosynthesis
vid00550
Peptidoglycan biosynthesis
vid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DBX26_02115
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DBX26_02115
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vid01011
]
DBX26_02115
Enzymes [BR:
vid01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DBX26_02115
Peptidoglycan biosynthesis and degradation proteins [BR:
vid01011
]
Precursor biosynthesis
Amino acid ligase
DBX26_02115
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GFIT
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NCBI-ProteinID:
AXT69896
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Position
1:443472..444953
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AA seq
493 aa
AA seq
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MTKAISMDALLSSWVDCPSLASVLVSELELDSRRVQPGTTFVAIVGHVVDGRKFIPAAIQ
QGANAVIAQACENKTHGTIEWVDDIPVIYLSALDKCLSEMAGQLYRYPTMDLIGVTGTNG
KTTITQLIAQWIELIGSKAAVMGTTGNGFLDNLQAAANTTGNAVEIQHTLASLAEQGAKY
TALEVSSHGLVQGRVKALSFSAGVFTNLSRDHLDYHGTMEDYASAKFSLFTQHQCEKAII
NVDDEVGAAWAKDLPNPIAVSLVPTTEFTNALWASNVTYAESGITIDFDGMFGSGTLYAP
LIGEFNAANLMLAFATLLSLGFDKQALLATANQLQPVLGRMELFQTDNRAKVVVDYAHTP
DALEKALQALRVHCDGQLWAIVGCGGDRDPGKRPMMAEIAERLGDKVVLTDDNPRSESPE
LIIKDMLAGLSKPDEAIIQHDRFKALSYALDNASAQDIILLAGKGHEDYQIRNGETIHYS
DRESAMQLLGLSS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagccatcagtatggacgcattgctgtcctcttgggttgattgcccaagttta
gcgtccgttcttgtctctgaactggaactcgacagccgaagagttcaacccggtaccact
tttgttgcgattgtcgggcacgtcgtggatggaaggaagtttattccggcggcaattcag
caaggtgcgaatgcagttattgcacaagcctgtgagaacaaaacgcatggcaccatagag
tgggttgatgacattccggttatttatttgagtgctttggataagtgtctgtctgaaatg
gcaggtcaactttatcgctatccaacaatggatcttattggtgttacaggaaccaatggc
aagaccaccatcacacaactgattgcgcagtggattgaactcatcggttcgaaagcggcc
gtgatggggacgacaggaaatggtttcttagataatttgcaagcagcagcgaacaccacc
ggcaacgcggtggaaattcaacatacgcttgcgtcattagctgagcagggcgcgaagtac
acggcgctggaagtttcttctcatggcttagtgcaaggacgagtgaaagctctgtcattt
tcggctggcgtgtttaccaatctgagccgagatcacctcgactatcatggcacgatggaa
gattacgcgagcgctaaatttagcctctttacccagcaccagtgtgaaaaagccattatt
aacgttgatgatgaagtcggtgcagcttgggctaaagatcttccaaatccgattgcagtt
tctttagtgccgacaactgagtttacaaacgcattatgggccagcaacgtcacgtatgca
gaatctggtattactatcgattttgacggtatgtttggcagcggcaccttatacgcacct
ttgattggggagttcaacgcggctaacttgatgttagcgtttgcgactttgctaagctta
ggttttgacaaacaagcgcttttggcgacggcgaatcaattgcagccggtattaggtcga
atggaactgttccagacagataaccgagccaaagttgtggttgattacgcgcacaccccg
gatgcattagaaaaagcgttgcaggcgctgcgtgtgcattgtgacggtcagctctgggcg
atcgtcggatgtggcggagatcgtgatccaggtaaacgtccaatgatggctgaaattgca
gagcgtttgggtgataaggttgtgttaacggacgacaacccgcgcagcgaaagccctgaa
ctcatcattaaagatatgctggctggattatcgaaacctgacgaggcgattattcagcac
gaccgtttcaaggctctgtcatatgcgctcgacaatgcgtcagcccaagacattatcttg
ctggcaggtaaaggccacgaagactatcaaattcgtaatggcgagacgatccattattcg
gatagagaatctgcaatgcagctattaggactgtcatcatga
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