Vagococcus intermedius: OL234_06520
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Entry
OL234_06520 CDS
T09229
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vie
Vagococcus intermedius
Pathway
vie03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OL234_06520 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vie03400
]
OL234_06520 (nth)
Enzymes [BR:
vie01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OL234_06520 (nth)
DNA repair and recombination proteins [BR:
vie03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OL234_06520 (nth)
Prokaryotic type
OL234_06520 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WEG72638
UniProt:
A0AAF0CTG3
LinkDB
All DBs
Position
complement(1403710..1404366)
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AA seq
218 aa
AA seq
DB search
MISKEKTLDIINIMAEMFPEAECELIHRNPFELVIAVALSAQATDVSVNKVTPKLFEKYP
TPEAFVAAPLDDIMAMIKTIGLYRNKARNIKACCELLLEKFNGEVPRTREELMELPGVGR
KTANVVLGDAFGVPAIAVDTHVERVSKRLRIVAQKASVLEIEKTLMRKIPEEMWVSTHHR
MIFFGRYHCTARQPKCETCPVLLLCQDGKNRLGIKQKS
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
ttgatttcaaaagaaaaaaccttagatattattaatattatggccgagatgtttccagaa
gctgaatgtgaactcattcatcgaaatccctttgagttggttattgcggttgctttaagc
gctcaagcaaccgatgtttctgttaacaaagtgacacctaaattatttgaaaaatatccg
acaccagaagctttcgtagctgctccgttagatgatattatggctatgatcaagacgatt
ggtctttatcgaaataaggctagaaatattaaagcttgctgtgagttattacttgaaaaa
tttaatggagaagttccacgtacacgagaagagttaatggaattacctggtgttggacgt
aaaactgccaatgttgttttaggagatgcctttggcgtacctgcaattgcagttgatact
catgtagagcgagtttcaaaacgtttacgaattgttgctcaaaaagcaagtgttttagaa
atagaaaagaccctgatgagaaagatcccagaagaaatgtgggtatctacgcatcatcgc
atgattttttttggtcgctaccattgtacagcgagacaacctaagtgtgaaacttgtcca
gtcttattgttatgtcaagacgggaagaaccgtttgggaattaaacaaaaaagctag
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