Vibrio sp. D3: ACHFJ9_18025
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Entry
ACHFJ9_18025 CDS
T11387
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vii Vibrio sp. D3
Pathway
vii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACHFJ9_18025 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vii03400
]
ACHFJ9_18025 (nth)
Enzymes [BR:
vii01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACHFJ9_18025 (nth)
DNA repair and recombination proteins [BR:
vii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACHFJ9_18025 (nth)
Prokaryotic type
ACHFJ9_18025 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XJJ25986
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All DBs
Position
2:2179126..2179767
Genome browser
AA seq
213 aa
AA seq
DB search
MNKIKRIEILERLRENNPNPQTELNWSSPFELLIAVLLSAQATDVSVNKATDKLFPVANT
PQSILDLGVDGLKEYIKTIGLFNSKAENTIKTCKILLEKHNGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKTVDDVEQKLLKVVPKEFKLDVHHWLI
LHGRYTCLARKPRCGSCIIEDLCEYKEKVYPDS
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaataaaaagaatcgaaattcttgagcgattacgagaaaacaatccgaatcct
caaactgagcttaactggagctccccttttgagctgctaatcgcggtattattatcagcg
caagcaaccgatgtaagtgtcaataaagccaccgacaaacttttccctgtcgctaataca
ccgcaaagtattctcgatttgggagttgatggcttaaaagaatacataaagaccatcggt
ttgtttaactcaaaggcagaaaacactatcaagacttgtaagatcttgttggaaaaacac
aatggtgaagttcctgaagatcgtgcagcgttagaagcgctaccaggcgtaggtcgcaag
accgcaaacgtcgtgctcaacaccgcttttggttggccaaccattgccgtcgatacgcac
atttatcgcgtgtcgaatcgtactaagtttgcaatgggcaaaacggttgatgatgtcgag
caaaagctattaaaagttgtgccaaaagagttcaaactcgatgtgcaccactggctcatt
cttcatggccgctacacgtgcttggcgagaaagcctcgctgcggtagctgcattattgaa
gatttgtgcgaatataaagagaaagtatatccagatagctaa
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